RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	USP11	P51784	963 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	SET	Q01105	290 aa	Predicted RBP	10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PRKCZ	Q05513	592 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ORC2	Q13416	577 aa	Predicted RBP	10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ATL3	Q6DD88	541 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	USP6NL	Q92738	828 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MAML3	Q96JK9	1138 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	GJD2	Q9UKL4	321 aa		10.8	□□□□□ -0.68
TUBA1A-208	ENST00000550811	WNT7A	O00755	349 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NEMF	O60524	1076 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	STAM2	O75886	525 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TDP2	O95551	362 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	BMP15	O95972	392 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NCL	P19338	710 aa	Known RBP	10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NDUFV2	P19404	249 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CYP2B6	P20813	491 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CIITA	P33076	1130 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MCM7	P33993	719 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FLT3LG	P49771	235 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	KRT85	P78386	507 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CAP1	Q01518	475 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	DNM1	Q05193	864 aa	Known RBP	10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	STXBP2	Q15833	593 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	OLFML2B	Q68BL8	750 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PPP4R3A	Q6IN85	833 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ARMCX2	Q7L311	632 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MSL3	Q8N5Y2	521 aa	Known RBP	10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NPLOC4	Q8TAT6	608 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MORC4	Q8TE76	937 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	TNPO1	Q92973	898 aa	Known RBP	10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	SRRD	Q9UH36	339 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	DDX25	Q9UHL0	483 aa	Known RBP	10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CEP131	Q9UPN4	1083 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PCDHB6	Q9Y5E3	794 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	SYNGAP1	Q96PV0	1343 aa		10.79	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CYP3A7-CYP3A51P	A0A087WV96	503 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PPP1R3G	B7ZBB8	358 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FAM86B1	E9PN63	330 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	SLC37A4	O43826	429 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	FAM86B2	P0C5J1	330 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	HSPA1A	P0DMV8	641 aa	Known RBP	10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	HSPA1B	P0DMV9	641 aa	Known RBP	10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	HSPA8	P11142	646 aa	Known RBP	10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	XRCC5	P13010	732 aa	Known RBP	10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CYP3A7	P24462	503 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MRPS9	P82933	396 aa	Known RBP	10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	GNPTAB	Q3T906	1256 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CEP55	Q53EZ4	464 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	PRR16	Q569H4	304 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	ANO1	Q5XXA6	986 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MAMDC4	Q6UXC1	1216 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NUDT18	Q6ZVK8	323 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	NIPA1	Q7RTP0	329 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	VSIG10L	Q86VR7	867 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	RDH13	Q8NBN7	331 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MBOAT7	Q96N66	472 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	INPP4A	Q96PE3	977 aa	Predicted RBP	10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	USP28	Q96RU2	1077 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	MXRA8	Q9BRK3	442 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	CFAP45	Q9UL16	551 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	GABRQ	Q9UN88	632 aa		10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	DDX49	Q9Y6V7	483 aa	Known RBP	10.78	□□□□□ -0.68
TUBA1A-208	ENST00000550811	IGLV3-22	A0A075B6J6	115 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	FOXN1	O15353	648 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	EDIL3	O43854	480 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	EIF3J	O75822	258 aa	Known RBP	10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	YEATS4	O95619	227 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	ITGB5	P18084	799 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	NASP	P49321	788 aa	Predicted RBP	10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	CTCF	P49711	727 aa	Predicted RBP	10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	PRMT2	P55345	433 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	CEBPZ	Q03701	1054 aa	Known RBP	10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	MTMR1	Q13613	665 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	SF3A1	Q15459	793 aa	Known RBP	10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	ZNF174	Q15697	407 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	CALCRL	Q16602	461 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	CCL14	Q16627	93 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811		Q4G0T1	1027 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	NLRX1	Q86UT6	975 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	PLA2G4D	Q86XP0	818 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	FBXO16	Q8IX29	292 aa	Predicted RBP	10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	TRMT44	Q8IYL2	757 aa	Known RBP	10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	RAET1E	Q8TD07	263 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	TATDN2	Q93075	761 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	LENG9	Q96B70	501 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	GPRASP2	Q96D09	838 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	CHAMP1	Q96JM3	812 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	CDHR1	Q96JP9	859 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	TINF2	Q9BSI4	451 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	PPP1R12C	Q9BZL4	782 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	VTA1	Q9NP79	307 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	JADE2	Q9NQC1	790 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	RTEL1	Q9NZ71	1219 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	FLRT1	Q9NZU1	646 aa		10.77	□□□□□ -0.69
TUBA1A-208	ENST00000550811	CNPY2	Q9Y2B0	182 aa		10.77	□□□□□ -0.69

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