RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 C17orf102A2RUQ5 167 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 RSPH10B2B2RC85 870 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 SPATA31C2B4DYI2 1134 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 RSPH10BP0C881 870 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 THPOP40225 353 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 ERVK-21P61565 698 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 SEMA3FQ13275 785 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 NEDD9Q14511 834 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 METTL7BQ6UX53 244 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 DBF4BQ8NFT6 615 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 ATP6V0A1Q93050 837 aa25.07■■□□□ 1.6
SMARCC2-210ENST00000550519 LINC01553A4QN01 128 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 SMIM10L2AP0DMW4 78 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 SMIM10L2BP0DMW5 78 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.06■■□□□ 1.65e-10■■■■■ 38
SMARCC2-210ENST00000550519 PIBF1Q8WXW3 757 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 HLA-CQ95604 372 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 TGS1Q96RS0 853 aaKnown RBP25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 SPZ1Q9BXG8 430 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 USP26Q9BXU7 913 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 RNPEPQ9H4A4 650 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 SUGCTQ9HAC7 445 aa25.06■■□□□ 1.6
SMARCC2-210ENST00000550519 NOP56O00567 594 aaKnown RBP25.05■■□□□ 1.6
SMARCC2-210ENST00000550519 FIBPO43427 364 aa25.05■■□□□ 1.6
SMARCC2-210ENST00000550519 COL9A1P20849 921 aa25.05■■□□□ 1.6
SMARCC2-210ENST00000550519 CYFIP1Q7L576 1253 aa25.05■■□□□ 1.6
SMARCC2-210ENST00000550519 GDPD5Q8WTR4 605 aa25.05■■□□□ 1.6
SMARCC2-210ENST00000550519 GPR20Q99678 358 aa25.05■■□□□ 1.6
SMARCC2-210ENST00000550519 LY9Q9HBG7 655 aa25.05■■□□□ 1.6
SMARCC2-210ENST00000550519 RTEL1Q9NZ71 1219 aa25.05■■□□□ 1.6
SMARCC2-210ENST00000550519 TREHO43280 583 aa25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 SMARCA1P28370 1054 aa25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 PLEKHG4Q58EX7 1191 aa25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 FAM117BQ6P1L5 589 aa25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 ZNF654Q8IZM8 581 aa25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 MTA3Q9BTC8 594 aa25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 INSL6Q9Y581 213 aa25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 RBM8AQ9Y5S9 174 aaKnown RBP25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 TCF20Q9UGU0 1960 aaKnown RBP25.04■■□□□ 1.6
SMARCC2-210ENST00000550519 PIK3CDO00329 1044 aa25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 MEIS2O14770 477 aa25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 CAND2O75155 1236 aa25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 DDAH1O94760 285 aa25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 USP17L6PQ6QN14 398 aa25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 CTCFLQ8NI51 663 aaPredicted RBP25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 RRP36Q96EU6 259 aaKnown RBP25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 SENP7Q9BQF6 1050 aa25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 MYL10Q9BUA6 226 aa25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 MTUS1Q9ULD2 1270 aa25.03■■□□□ 1.6
SMARCC2-210ENST00000550519 AMHP03971 560 aa25.02■■□□□ 1.6
SMARCC2-210ENST00000550519 KIF5BP33176 963 aa25.02■■□□□ 1.6
SMARCC2-210ENST00000550519 HTRA4P83105 476 aaPredicted RBP25.02■■□□□ 1.6
SMARCC2-210ENST00000550519 PCNX4Q63HM2 1172 aa25.02■■□□□ 1.6
SMARCC2-210ENST00000550519 XRRA1Q6P2D8 792 aa25.02■■□□□ 1.6
SMARCC2-210ENST00000550519 SMARCC2Q8TAQ2 1214 aa25.02■■□□□ 1.6
SMARCC2-210ENST00000550519 TELO2Q9Y4R8 837 aa25.02■■□□□ 1.6
SMARCC2-210ENST00000550519 ADAM17P78536 824 aa25.01■■□□□ 1.59
SMARCC2-210ENST00000550519 TRIM50Q86XT4 487 aa25.01■■□□□ 1.59
SMARCC2-210ENST00000550519 MYOCDQ8IZQ8 938 aa25.01■■□□□ 1.59
SMARCC2-210ENST00000550519 CUL5Q93034 780 aa25.01■■□□□ 1.59
SMARCC2-210ENST00000550519 LZTS2Q9BRK4 669 aa25.01■■□□□ 1.59
SMARCC2-210ENST00000550519 OSBPL7Q9BZF2 842 aa25.01■■□□□ 1.59
SMARCC2-210ENST00000550519 SETD4Q9NVD3 440 aa25.01■■□□□ 1.59
SMARCC2-210ENST00000550519 COL4A4P53420 1690 aaPredicted RBP25.01■■□□□ 1.59
SMARCC2-210ENST00000550519 GNAT1P11488 350 aa25■■□□□ 1.59
SMARCC2-210ENST00000550519 CASC1Q6TDU7 716 aa25■■□□□ 1.59
SMARCC2-210ENST00000550519 SP7Q8TDD2 431 aaPredicted RBP25■■□□□ 1.59
SMARCC2-210ENST00000550519 SEPT8Q92599 483 aa25■■□□□ 1.59
SMARCC2-210ENST00000550519 PRC1O43663 620 aa24.99■■□□□ 1.59
SMARCC2-210ENST00000550519 GNAQP50148 359 aa24.99■■□□□ 1.59
SMARCC2-210ENST00000550519 TMTC2Q8N394 836 aa24.99■■□□□ 1.59
SMARCC2-210ENST00000550519 SRBD1Q8N5C6 995 aaKnown RBP24.99■■□□□ 1.59
SMARCC2-210ENST00000550519 C17orf80Q9BSJ5 609 aa24.99■■□□□ 1.59
SMARCC2-210ENST00000550519 SEC63Q9UGP8 760 aaKnown RBP24.99■■□□□ 1.59
SMARCC2-210ENST00000550519 ZNF215Q9UL58 517 aaPredicted RBP24.99■■□□□ 1.59
SMARCC2-210ENST00000550519 PLEKHA8P1O95397 391 aa24.98■■□□□ 1.59
SMARCC2-210ENST00000550519 CTSHP09668 335 aa24.98■■□□□ 1.59
SMARCC2-210ENST00000550519 NLRX1Q86UT6 975 aa24.98■■□□□ 1.59
SMARCC2-210ENST00000550519 TOP1MTQ969P6 601 aa24.98■■□□□ 1.59
SMARCC2-210ENST00000550519 BRWD1Q9NSI6 2320 aa24.98■■□□□ 1.59
SMARCC2-210ENST00000550519 SH2B2O14492 632 aaPredicted RBP24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 MCM5P33992 734 aa24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 COL9A3Q14050 684 aaPredicted RBP24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 FAM26DQ5JW98 314 aa24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 UTP14CQ5TAP6 766 aaKnown RBP24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 GIMAP8Q8ND71 665 aaPredicted RBP24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 FBXO22Q8NEZ5 403 aa24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 LMBR1Q8WVP7 490 aa24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 GPRASP2Q96D09 838 aa24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 TMEM87BQ96K49 555 aa24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 LSG1Q9H089 658 aaKnown RBP24.97■■□□□ 1.59
SMARCC2-210ENST00000550519 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.96■■□□□ 1.59
SMARCC2-210ENST00000550519 LIFRP42702 1097 aa24.96■■□□□ 1.59
SMARCC2-210ENST00000550519 SP4Q02446 784 aa24.96■■□□□ 1.59
SMARCC2-210ENST00000550519 NFXL1Q6ZNB6 911 aa24.96■■□□□ 1.59
SMARCC2-210ENST00000550519 C1QTNF1Q9BXJ1 281 aa24.96■■□□□ 1.59
SMARCC2-210ENST00000550519 RAPGEFL1Q9UHV5 662 aa24.96■■□□□ 1.59
SMARCC2-210ENST00000550519 MICAL3Q7RTP6 2002 aa24.96■■□□□ 1.59
SMARCC2-210ENST00000550519 NRCAMQ92823 1304 aa24.95■■□□□ 1.58
SMARCC2-210ENST00000550519 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms