RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, human

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARFGAP1-223	ENST00000550188	MFSD5	Q6N075	450 aa		13.63	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	SESTD1	Q86VW0	696 aa		13.63	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	GPR20	Q99678	358 aa		13.63	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	MXRA8	Q9BRK3	442 aa		13.63	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	PPP1R12C	Q9BZL4	782 aa		13.63	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	BCAS3	Q9H6U6	928 aa		13.63	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	TRMT13	Q9NUP7	481 aa	Known RBP	13.63	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	HAS3	O00219	553 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	LGALS2	P05162	132 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	ZNF76	P36508	570 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	MCM2	P49736	904 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	KIAA0753	Q2KHM9	967 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	NIPA1	Q7RTP0	329 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	TMEM199	Q8N511	208 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	C7orf31	Q8N865	590 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	PPP1R13L	Q8WUF5	828 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	C16orf70	Q9BSU1	422 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	NOC4L	Q9BVI4	516 aa	Known RBP	13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	KCNH7	Q9NS40	1196 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	NOD1	Q9Y239	953 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	LTBP2	Q14767	1821 aa		13.62	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	KIAA1217	Q5T5P2	1943 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	MEIS1	O00470	390 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	ADAMTS3	O15072	1205 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	ATP9A	O75110	1047 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CYP3A4	P08684	503 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	XBP1	P17861	261 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CYP2C18	P33260	490 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	SP4	Q02446	784 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	PPIG	Q13427	754 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	8e-13	■■□□□ 13.9
ARFGAP1-223	ENST00000550188	PTGIS	Q16647	500 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	ME3	Q16798	604 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	LRIT3	Q3SXY7	679 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	GALNT17	Q6IS24	598 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	DAGLB	Q8NCG7	672 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CYP2W1	Q8TAV3	490 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	RASGRP4	Q8TDF6	673 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CRYGN	Q8WXF5	182 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	GTF3C6	Q969F1	213 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	ALG1	Q9BT22	464 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	PKD2L1	Q9P0L9	805 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	GTF2IRD1	Q9UHL9	959 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	ZNF215	Q9UL58	517 aa	Predicted RBP	13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	PCDHA4	Q9UN74	947 aa		13.61	□□□□□ -0.23
ARFGAP1-223	ENST00000550188		H3BRB1	525 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CEP290	O15078	2479 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	LARGE1	O95461	756 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CYP2C9	P11712	490 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CSF2RA	P15509	400 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	SET	Q01105	290 aa	Predicted RBP	13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	GDF6	Q6KF10	455 aa	Predicted RBP	13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	NECAB1	Q8N987	351 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	WASF1	Q92558	559 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	AIFM3	Q96NN9	605 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	SDF4	Q9BRK5	362 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	TUT1	Q9H6E5	874 aa	Known RBP	13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	AGO4	Q9HCK5	861 aa	Known RBP	13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	JPH1	Q9HDC5	661 aa	Predicted RBP	13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	HDAC6	Q9UBN7	1215 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	NFASC	O94856	1347 aa		13.6	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	IGLV3-22	A0A075B6J6	115 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	FAM86B1	E9PN63	330 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	PITPNM1	O00562	1244 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CTDNEP1	O95476	244 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	FAM86B2	P0C5J1	330 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	AR	P10275	920 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	TCF7	P36402	384 aa	Predicted RBP	13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	EPHB4	P54760	987 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	SHH	Q15465	462 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	C9orf50	Q5SZB4	431 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	UTP14C	Q5TAP6	766 aa	Known RBP	13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	PLA2G4D	Q86XP0	818 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	TRIM50	Q86XT4	487 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	BLID	Q8IZY5	108 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	CCDC155	Q8N6L0	562 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	SEPT1	Q8WYJ6	367 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	KIF2C	Q99661	725 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	ORC3	Q9UBD5	711 aa	Predicted RBP	13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	SLC9A2	Q9UBY0	812 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	LIMCH1	Q9UPQ0	1083 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	TELO2	Q9Y4R8	837 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	UMODL1	Q5DID0	1318 aa		13.59	□□□□□ -0.23
ARFGAP1-223	ENST00000550188	SCN10A	Q9Y5Y9	1956 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CCL23	P55773	120 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	ITGB3BP	Q13352	177 aa	Predicted RBP	13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	BFSP2	Q13515	415 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	NPY5R	Q15761	445 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	RETREG2	Q8NC44	543 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	NSUN7	Q8NE18	718 aa	Known RBP	13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CAGE1	Q8TC20	777 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	RNPC3	Q96LT9	517 aa	Known RBP	13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	CTAGE1	Q96RT6	745 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	PHF20	Q9BVI0	1012 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	WNT8A	Q9H1J5	351 aa		13.58	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	GSTTP1	A0A1W2PQM5	241 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	C17orf102	A2RUQ5	167 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188		M0R2N6	131 aa		13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	IPO5	O00410	1097 aa	Known RBP	13.57	□□□□□ -0.24
ARFGAP1-223	ENST00000550188	SOX1	O00570	391 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms