RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PPFIA4O75335 1185 aa22.01■■□□□ 1.11
DDX54-207ENST00000550016 RTP1P59025 263 aa22.01■■□□□ 1.11
DDX54-207ENST00000550016 GUCY1B3Q02153 619 aa22.01■■□□□ 1.11
DDX54-207ENST00000550016 CUL4AQ13619 759 aa22.01■■□□□ 1.11
DDX54-207ENST00000550016 SAFBQ15424 915 aaKnown RBP eCLIP22.01■■□□□ 1.11
DDX54-207ENST00000550016 FBXO18Q8NFZ0 1043 aa22.01■■□□□ 1.11
DDX54-207ENST00000550016 AGO4Q9HCK5 861 aaKnown RBP22.01■■□□□ 1.11
DDX54-207ENST00000550016 PKD2L1Q9P0L9 805 aa22.01■■□□□ 1.11
DDX54-207ENST00000550016 WDR81Q562E7 1941 aa22.01■■□□□ 1.11
DDX54-207ENST00000550016 BTBD18B2RXH4 712 aa22■■□□□ 1.11
DDX54-207ENST00000550016 HOXD8P13378 290 aaPredicted RBP22■■□□□ 1.11
DDX54-207ENST00000550016 SETQ01105 290 aaPredicted RBP22■■□□□ 1.11
DDX54-207ENST00000550016 NR5A1Q13285 461 aa22■■□□□ 1.11
DDX54-207ENST00000550016 INF2Q27J81 1249 aa22■■□□□ 1.11
DDX54-207ENST00000550016 DIS3L2Q8IYB7 885 aaKnown RBP22■■□□□ 1.11
DDX54-207ENST00000550016 TNFRSF25Q93038 417 aa22■■□□□ 1.11
DDX54-207ENST00000550016 SNX21Q969T3 373 aa22■■□□□ 1.11
DDX54-207ENST00000550016 SMC3Q9UQE7 1217 aa22■■□□□ 1.11
DDX54-207ENST00000550016 NR2E3Q9Y5X4 410 aa22■■□□□ 1.11
DDX54-207ENST00000550016 NFASCO94856 1347 aa22■■□□□ 1.11
DDX54-207ENST00000550016 CYP3A7-CYP3A51PA0A087WV96 503 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 ARVCFO00192 962 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 NOP56O00567 594 aaKnown RBP21.99■■□□□ 1.11
DDX54-207ENST00000550016 CYP3A7P24462 503 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 GJB2P29033 226 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 CDK7P50613 346 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 ITGA7Q13683 1181 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 PRR16Q569H4 304 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 PIK3AP1Q6ZUJ8 805 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 SLC43A3Q8NBI5 491 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 SDF4Q9BRK5 362 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 SEZ6LQ9BYH1 1024 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 ATP11BQ9Y2G3 1177 aa21.99■■□□□ 1.11
DDX54-207ENST00000550016 MYH9P35579 1960 aaKnown RBP21.99■■□□□ 1.11
DDX54-207ENST00000550016 PSMC6P62333 389 aa21.98■■□□□ 1.11
DDX54-207ENST00000550016 TRIM60Q495X7 471 aa21.98■■□□□ 1.11
DDX54-207ENST00000550016 MOXD1Q6UVY6 613 aa21.98■■□□□ 1.11
DDX54-207ENST00000550016 NEK8Q86SG6 692 aa21.98■■□□□ 1.11
DDX54-207ENST00000550016 C7orf61Q8IZ16 206 aa21.98■■□□□ 1.11
DDX54-207ENST00000550016 GPR20Q99678 358 aa21.98■■□□□ 1.11
DDX54-207ENST00000550016 GRIN2DO15399 1336 aa21.98■■□□□ 1.11
DDX54-207ENST00000550016 TRIP12Q14669 1992 aaPredicted RBP21.98■■□□□ 1.11
DDX54-207ENST00000550016 CEP290O15078 2479 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 K7ELQ4 463 aaPredicted RBP21.97■■□□□ 1.11
DDX54-207ENST00000550016 IPO5O00410 1097 aaKnown RBP21.97■■□□□ 1.11
DDX54-207ENST00000550016 SP4Q02446 784 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 TLE2Q04725 743 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 ITGB3BPQ13352 177 aaPredicted RBP21.97■■□□□ 1.11
DDX54-207ENST00000550016 EARS2Q5JPH6 523 aaKnown RBP21.97■■□□□ 1.11
DDX54-207ENST00000550016 ANKRD33Q7Z3H0 272 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 LENG9Q96B70 501 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 MBOAT7Q96N66 472 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 ZNF577Q9BSK1 485 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 JPH1Q9HDC5 661 aaPredicted RBP21.97■■□□□ 1.11
DDX54-207ENST00000550016 SLC9A2Q9UBY0 812 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 MROH7Q68CQ1 1323 aa21.97■■□□□ 1.11
DDX54-207ENST00000550016 LETM2Q2VYF4 491 aa21.96■■□□□ 1.11
DDX54-207ENST00000550016 NBPF20Q3BBV1 942 aa21.96■■□□□ 1.11
DDX54-207ENST00000550016 Q4G0T1 1027 aa21.96■■□□□ 1.11
DDX54-207ENST00000550016 SEPT1Q8WYJ6 367 aa21.96■■□□□ 1.11
DDX54-207ENST00000550016 KAT2BQ92831 832 aa21.96■■□□□ 1.11
DDX54-207ENST00000550016 TOX2Q96NM4 488 aa21.96■■□□□ 1.11
DDX54-207ENST00000550016 NAP1L4Q99733 375 aaKnown RBP21.96■■□□□ 1.11
DDX54-207ENST00000550016 FOXP1Q9H334 677 aaPredicted RBP21.96■■□□□ 1.11
DDX54-207ENST00000550016 TBC1D22BQ9NU19 505 aa21.96■■□□□ 1.11
DDX54-207ENST00000550016 TELO2Q9Y4R8 837 aa21.96■■□□□ 1.11
DDX54-207ENST00000550016 FAM205CA6NFA0 338 aa21.95■■□□□ 1.1
DDX54-207ENST00000550016 DCDC2CA8MYV0 355 aa21.95■■□□□ 1.1
DDX54-207ENST00000550016 PQBP1O60828 265 aaKnown RBP21.95■■□□□ 1.1
DDX54-207ENST00000550016 TDP2O95551 362 aa21.95■■□□□ 1.1
DDX54-207ENST00000550016 ZNF286BP0CG31 522 aa21.95■■□□□ 1.1
DDX54-207ENST00000550016 GCFC2P16383 781 aaKnown RBP21.95■■□□□ 1.1
DDX54-207ENST00000550016 PPP4R3AQ6IN85 833 aa21.95■■□□□ 1.1
DDX54-207ENST00000550016 C16orf70Q9BSU1 422 aa21.95■■□□□ 1.1
DDX54-207ENST00000550016 KATNAL1Q9BW62 490 aa21.95■■□□□ 1.1
DDX54-207ENST00000550016 DDX25Q9UHL0 483 aaKnown RBP21.95■■□□□ 1.1
DDX54-207ENST00000550016 GSTTP1A0A1W2PQM5 241 aa21.94■■□□□ 1.1
DDX54-207ENST00000550016 MSH4O15457 936 aa21.94■■□□□ 1.1
DDX54-207ENST00000550016 DHX15O43143 795 aaKnown RBP21.94■■□□□ 1.1
DDX54-207ENST00000550016 F2P00734 622 aa21.94■■□□□ 1.1
DDX54-207ENST00000550016 LGALS2P05162 132 aa21.94■■□□□ 1.1
DDX54-207ENST00000550016 PSEN2P49810 448 aa21.94■■□□□ 1.1
DDX54-207ENST00000550016 NFRKBQ6P4R8 1299 aa21.94■■□□□ 1.1
DDX54-207ENST00000550016 INTS4Q96HW7 963 aaKnown RBP21.94■■□□□ 1.1
DDX54-207ENST00000550016 UIMC1Q96RL1 719 aa21.94■■□□□ 1.1
DDX54-207ENST00000550016 HAS3O00219 553 aa21.93■■□□□ 1.1
DDX54-207ENST00000550016 TLR3O15455 904 aaKnown RBP21.93■■□□□ 1.1
DDX54-207ENST00000550016 CCNT1O60563 726 aaKnown RBP21.93■■□□□ 1.1
DDX54-207ENST00000550016 TCF7P36402 384 aaPredicted RBP21.93■■□□□ 1.1
DDX54-207ENST00000550016 CHMP4BP1P59074 171 aa21.93■■□□□ 1.1
DDX54-207ENST00000550016 ACTR2P61160 394 aa21.93■■□□□ 1.1
DDX54-207ENST00000550016 PTPN11Q06124 597 aaPredicted RBP21.93■■□□□ 1.1
DDX54-207ENST00000550016 GNL2Q13823 731 aaKnown RBP21.93■■□□□ 1.1
DDX54-207ENST00000550016 MFSD10Q14728 455 aa21.93■■□□□ 1.1
DDX54-207ENST00000550016 HSCBQ8IWL3 235 aa21.93■■□□□ 1.1
DDX54-207ENST00000550016 H0YGN5 161 aa21.92■■□□□ 1.1
DDX54-207ENST00000550016 H3BRB1 525 aa21.92■■□□□ 1.1
DDX54-207ENST00000550016 DDX39AO00148 427 aaKnown RBP21.92■■□□□ 1.1
DDX54-207ENST00000550016 KIAA0753Q2KHM9 967 aa21.92■■□□□ 1.1
DDX54-207ENST00000550016 UTP14CQ5TAP6 766 aaKnown RBP21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms