RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 PPFIA4O75335 1185 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 ITGB3BPQ13352 177 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-208ENST00000549995 SESTD1Q86VW0 696 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 DIS3L2Q8IYB7 885 aaKnown RBP13.55□□□□□ -0.24
PFDN5-208ENST00000549995 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 KAT2BQ92831 832 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 GPR20Q99678 358 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 MTG1Q9BT17 334 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-208ENST00000549995 FOXP1Q9H334 677 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-208ENST00000549995 BRMS1Q9HCU9 246 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 STARD7Q9NQZ5 370 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 KIF3AQ9Y496 699 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-208ENST00000549995 GRIN2DO15399 1336 aa13.55□□□□□ -0.24
PFDN5-208ENST00000549995 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 K7ELQ4 463 aaPredicted RBP13.54□□□□□ -0.24
PFDN5-208ENST00000549995 ATG7O95352 703 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 ARP10275 920 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 GCFC2P16383 781 aaKnown RBP13.54□□□□□ -0.24
PFDN5-208ENST00000549995 HOXC8P31273 242 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
PFDN5-208ENST00000549995 NR5A1Q13285 461 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 TRIM29Q14134 588 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 DGKDQ16760 1214 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
PFDN5-208ENST00000549995 B3GNT9Q6UX72 402 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 CXCL17Q6UXB2 119 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 NAP1L4Q99733 375 aaKnown RBP13.54□□□□□ -0.24
PFDN5-208ENST00000549995 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 MROH7Q68CQ1 1323 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 EMSYQ7Z589 1322 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 MYH15Q9Y2K3 1946 aa13.54□□□□□ -0.24
PFDN5-208ENST00000549995 CEP290O15078 2479 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 IGKV6D-21A0A0A0MT36 114 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 CCDC194A0A1B0GVG4 234 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 ARVCFO00192 962 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 LGR5O75473 907 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.242e-15■■■■■ 33.6
PFDN5-208ENST00000549995 GJB2P29033 226 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 RTP1P59025 263 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 NFRKBQ6P4R8 1299 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 NEK8Q86SG6 692 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 FAM184AQ8NB25 1140 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 ETNPPLQ8TBG4 499 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 SLC5A5Q92911 643 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 SPATA33Q96N06 139 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 C16orf70Q9BSU1 422 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 KCNMB3Q9NPA1 279 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 TBC1D22BQ9NU19 505 aa13.53□□□□□ -0.24
PFDN5-208ENST00000549995 MYH9P35579 1960 aaKnown RBP13.52□□□□□ -0.24
PFDN5-208ENST00000549995 GSTTP1A0A1W2PQM5 241 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.25
PFDN5-208ENST00000549995 TBX3O15119 743 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 MSH4O15457 936 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 CD4P01730 458 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 ZNF76P36508 570 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.25
PFDN5-208ENST00000549995 INF2Q27J81 1249 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 PIK3AP1Q6ZUJ8 805 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 FAM126BQ8IXS8 530 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 FERMT2Q96AC1 680 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 RIT2Q99578 217 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 KATNAL1Q9BW62 490 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 JPH1Q9HDC5 661 aaPredicted RBP13.52□□□□□ -0.25
PFDN5-208ENST00000549995 SLC9A2Q9UBY0 812 aa13.52□□□□□ -0.25
PFDN5-208ENST00000549995 FAM205CA6NFA0 338 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 TDP2O95551 362 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 LGALS2P05162 132 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 MYL3P08590 195 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 TRAPPC10P48553 1259 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 ITGA7Q13683 1181 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 SAFBQ15424 915 aaKnown RBP eCLIP13.51□□□□□ -0.25
PFDN5-208ENST00000549995 TRIM60Q495X7 471 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
PFDN5-208ENST00000549995 SEPT1Q8WYJ6 367 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 SDF4Q9BRK5 362 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 SMC3Q9UQE7 1217 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 TELO2Q9Y4R8 837 aa13.51□□□□□ -0.25
PFDN5-208ENST00000549995 KIF28PB7ZC32 967 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 KIAA0355O15063 1070 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 SLC37A4O43826 429 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 PSMD10O75832 226 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 CCNE2O96020 404 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 PSEN2P49810 448 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 ATN1P54259 1190 aaPredicted RBP13.5□□□□□ -0.25
PFDN5-208ENST00000549995 ACTR2P61160 394 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 KRT76Q01546 638 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 PRR16Q569H4 304 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 ABHD15Q6UXT9 468 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 NOSTRINQ8IVI9 506 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 SMAP1Q8IYB5 467 aaPredicted RBP13.5□□□□□ -0.25
PFDN5-208ENST00000549995 RDM1Q8NG50 284 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 AFAP1L1Q8TED9 768 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 PCYT2Q99447 389 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 ZNF577Q9BSK1 485 aa13.5□□□□□ -0.25
PFDN5-208ENST00000549995 PDLIM7Q9NR12 457 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms