RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 CPA1P15085 419 aa18.76■□□□□ 0.59
VPS29-207ENST00000549970 FGD1P98174 961 aa18.76■□□□□ 0.59
VPS29-207ENST00000549970 PTK7Q13308 1070 aa18.76■□□□□ 0.59
VPS29-207ENST00000549970 HIC1Q14526 733 aa18.76■□□□□ 0.59
VPS29-207ENST00000549970 WWC2Q6AWC2 1192 aa18.76■□□□□ 0.59
VPS29-207ENST00000549970 WNT8BQ93098 351 aa18.76■□□□□ 0.59
VPS29-207ENST00000549970 PRDM12Q9H4Q4 367 aa18.76■□□□□ 0.59
VPS29-207ENST00000549970 TUT1Q9H6E5 874 aaKnown RBP18.76■□□□□ 0.59
VPS29-207ENST00000549970 HMGB1P09429 215 aaKnown RBP18.75■□□□□ 0.59
VPS29-207ENST00000549970 RBL2Q08999 1139 aa18.75■□□□□ 0.59
VPS29-207ENST00000549970 PPP2R2DQ66LE6 453 aa18.75■□□□□ 0.59
VPS29-207ENST00000549970 JAKMIP1Q96N16 626 aaKnown RBP18.75■□□□□ 0.59
VPS29-207ENST00000549970 GAS2L1Q99501 681 aaPredicted RBP18.75■□□□□ 0.59
VPS29-207ENST00000549970 GPR20Q99678 358 aa18.75■□□□□ 0.59
VPS29-207ENST00000549970 USP26Q9BXU7 913 aa18.75■□□□□ 0.59
VPS29-207ENST00000549970 PCDHA6Q9UN73 950 aa18.75■□□□□ 0.59
VPS29-207ENST00000549970 TELO2Q9Y4R8 837 aa18.75■□□□□ 0.59
VPS29-207ENST00000549970 PCDHA8Q9Y5H6 950 aa18.75■□□□□ 0.59
VPS29-207ENST00000549970 PCDHA11Q9Y5I1 949 aa18.75■□□□□ 0.59
VPS29-207ENST00000549970 C17orf102A2RUQ5 167 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 SMIM10L2AP0DMW4 78 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 SMIM10L2BP0DMW5 78 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 NAPAP54920 295 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 FUT2Q10981 343 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 GPNMBQ14956 572 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 TRIM71Q2Q1W2 868 aaKnown RBP18.74■□□□□ 0.59
VPS29-207ENST00000549970 UTP14CQ5TAP6 766 aaKnown RBP18.74■□□□□ 0.59
VPS29-207ENST00000549970 TYW1BQ6NUM6 668 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 TRIM50Q86XT4 487 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 SLC9A7Q96T83 725 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 SENP7Q9BQF6 1050 aa18.74■□□□□ 0.59
VPS29-207ENST00000549970 V9GY48 417 aaPredicted RBP18.74■□□□□ 0.59
VPS29-207ENST00000549970 VCANP13611 3396 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 RBAK-RBAKDNI3L0D1 243 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 NBNO60934 754 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 PARNO95453 639 aaKnown RBP18.73■□□□□ 0.59
VPS29-207ENST00000549970 ITGB5P18084 799 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 CDC27P30260 824 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 HSPA4P34932 840 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 ZNF618Q5T7W0 954 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 Q6ZUG5 572 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 KCNB2Q92953 911 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 ATP6V0A1Q93050 837 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 GPRASP2Q96D09 838 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 PKD2L1Q9P0L9 805 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 SNX14Q9Y5W7 946 aa18.73■□□□□ 0.59
VPS29-207ENST00000549970 ATP9AO75110 1047 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 BAIAP3O94812 1187 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 KCNJ6P48051 423 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 APOBRQ0VD83 1088 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 MTMR1Q13613 665 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 BLOC1S2Q6QNY1 142 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 SERINC5Q86VE9 423 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 GIMAP8Q8ND71 665 aaPredicted RBP18.72■□□□□ 0.59
VPS29-207ENST00000549970 PHOSPHO2Q8TCD6 241 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 CDHR1Q96JP9 859 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 PGBD1Q96JS3 809 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 RNPEPQ9H4A4 650 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 EHMT1Q9H9B1 1298 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 FAM217BQ9NTX9 383 aaPredicted RBP18.72■□□□□ 0.59
VPS29-207ENST00000549970 ZNF215Q9UL58 517 aaPredicted RBP18.72■□□□□ 0.59
VPS29-207ENST00000549970 UBIAD1Q9Y5Z9 338 aa18.72■□□□□ 0.59
VPS29-207ENST00000549970 STXBP3O00186 592 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 TREHO43280 583 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 CXCL10P02778 98 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 NEFLP07196 543 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 CA3P07451 260 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 KCNA2P16389 499 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 THPOP40225 353 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 METAP2P50579 478 aaKnown RBP eCLIP18.71■□□□□ 0.59
VPS29-207ENST00000549970 ADCY7P51828 1080 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 RCAN1P53805 252 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 PPP1R18Q6NYC8 613 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 CNKSR3Q6P9H4 555 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 TRAF7Q6Q0C0 670 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 HERC6Q8IVU3 1022 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 USP38Q8NB14 1042 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 PPM1EQ8WY54 764 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 BRF1Q92994 677 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 RIC8AQ9NPQ8 531 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 JADE2Q9NQC1 790 aa18.71■□□□□ 0.59
VPS29-207ENST00000549970 REC8O95072 547 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 IGFBP4P22692 258 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 HOXC8P31273 242 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 ADD1P35611 737 aaKnown RBP18.7■□□□□ 0.58
VPS29-207ENST00000549970 TCF7P36402 384 aaPredicted RBP18.7■□□□□ 0.58
VPS29-207ENST00000549970 WDR5P61964 334 aaKnown RBP18.7■□□□□ 0.58
VPS29-207ENST00000549970 ADGRE1Q14246 886 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 MBTPS1Q14703 1052 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 SETD4Q9NVD3 440 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 BARHL2Q9NY43 387 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 PTPRSQ13332 1948 aa18.7■□□□□ 0.58
VPS29-207ENST00000549970 SMCO2A6NFE2 343 aa18.69■□□□□ 0.58
VPS29-207ENST00000549970 RSPH10B2B2RC85 870 aa18.69■□□□□ 0.58
VPS29-207ENST00000549970 KIF28PB7ZC32 967 aa18.69■□□□□ 0.58
VPS29-207ENST00000549970 hCG_1984214I3L0E3 225 aa18.69■□□□□ 0.58
VPS29-207ENST00000549970 RSPH10BP0C881 870 aa18.69■□□□□ 0.58
VPS29-207ENST00000549970 TMCO2Q7Z6W1 182 aaPredicted RBP18.69■□□□□ 0.58
VPS29-207ENST00000549970 ZNF713Q8N859 430 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms