RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 WDR81Q562E7 1941 aa11.21□□□□□ -0.62
HDAC7-229ENST00000549883 GRXCR1A8MXD5 290 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 EDIL3O43854 480 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 PPFIA4O75335 1185 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 STAM2O75886 525 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 LGALS2P05162 132 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 AK2P54819 239 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 SCRN1Q12765 414 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 PTGISQ16647 500 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 GNPTABQ3T906 1256 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 C8orf34Q49A92 452 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 UTP14CQ5TAP6 766 aaKnown RBP11.2□□□□□ -0.62
HDAC7-229ENST00000549883 METTL7BQ6UX53 244 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 ZNF365Q70YC5 407 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 ZNF274Q96GC6 653 aaPredicted RBP11.2□□□□□ -0.62
HDAC7-229ENST00000549883 MXRA8Q9BRK3 442 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 ZMYND12Q9H0C1 365 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 GJB4Q9NTQ9 266 aa11.2□□□□□ -0.62
HDAC7-229ENST00000549883 CXXC1Q9P0U4 656 aaPredicted RBP11.2□□□□□ -0.62
HDAC7-229ENST00000549883 PTPRSQ13332 1948 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 GSTTP1A0A1W2PQM5 241 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 hCG_1984214I3L0E3 225 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 CTDNEP1O95476 244 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 SREBF1P36956 1147 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 PPIGQ13427 754 aaKnown RBP eCLIP11.19□□□□□ -0.62
HDAC7-229ENST00000549883 MTMR1Q13613 665 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 NEDD9Q14511 834 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 GPNMBQ14956 572 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 XRRA1Q6P2D8 792 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 NLRX1Q86UT6 975 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 TMEM199Q8N511 208 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 ZNF713Q8N859 430 aaPredicted RBP11.19□□□□□ -0.62
HDAC7-229ENST00000549883 NECAB1Q8N987 351 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 CRYGNQ8WXF5 182 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 GPRASP2Q96D09 838 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 IL17RAQ96F46 866 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 RNPC3Q96LT9 517 aaKnown RBP11.19□□□□□ -0.62
HDAC7-229ENST00000549883 RNF26Q9BY78 433 aaPredicted RBP11.19□□□□□ -0.62
HDAC7-229ENST00000549883 IL23AQ9NPF7 189 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 GTF2IRD1Q9UHL9 959 aa11.19□□□□□ -0.62
HDAC7-229ENST00000549883 ESYT2A0FGR8 921 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 FAM86B1E9PN63 330 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 H3BRB1 525 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 NOP56O00567 594 aaKnown RBP11.18□□□□□ -0.62
HDAC7-229ENST00000549883 FAM86B2P0C5J1 330 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 SUPT20HL2P0C7V6 817 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 ANAPC15P60006 121 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 ARHGAP4P98171 946 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 PTPN11Q06124 597 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-229ENST00000549883 SSRP1Q08945 709 aaKnown RBP11.18□□□□□ -0.62
HDAC7-229ENST00000549883 ST3GAL1Q11201 340 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 ITGB3BPQ13352 177 aaPredicted RBP11.18□□□□□ -0.62
HDAC7-229ENST00000549883 TCTN1Q2MV58 587 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 TRIM71Q2Q1W2 868 aaKnown RBP11.18□□□□□ -0.62
HDAC7-229ENST00000549883 OTOP2Q7RTS6 562 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 DEFB128Q7Z7B8 93 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 C7orf31Q8N865 590 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 FAM161BQ96MY7 647 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 PCYT2Q99447 389 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 SENP7Q9BQF6 1050 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 SEZ6LQ9BYH1 1024 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 RNPEPQ9H4A4 650 aa11.18□□□□□ -0.62
HDAC7-229ENST00000549883 TUT1Q9H6E5 874 aaKnown RBP11.18□□□□□ -0.62
HDAC7-229ENST00000549883 MYO9BQ13459 2157 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 IGLV3-22A0A075B6J6 115 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 DDX39AO00148 427 aaKnown RBP11.17□□□□□ -0.62
HDAC7-229ENST00000549883 MEIS1O00470 390 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 PFKFB2O60825 505 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 FOSP01100 380 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-229ENST00000549883 IQCF3P0C7M6 154 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 SMIM10L2AP0DMW4 78 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 SMIM10L2BP0DMW5 78 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 TCF7P36402 384 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-229ENST00000549883 PBX2P40425 430 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 NEK4P51957 841 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 AKAP17AQ02040 695 aaKnown RBP11.17□□□□□ -0.62
HDAC7-229ENST00000549883 AP3B2Q13367 1082 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 NPY5RQ15761 445 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 ME3Q16798 604 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 CEP55Q53EZ4 464 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 RASIP1Q5U651 963 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 TRAF7Q6Q0C0 670 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 REXO1Q8N1G1 1221 aaKnown RBP11.17□□□□□ -0.62
HDAC7-229ENST00000549883 DEFB123Q8N688 67 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 ZBTB10Q96DT7 871 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 KIF2CQ99661 725 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 SLKQ9H2G2 1235 aaPredicted RBP11.17□□□□□ -0.62
HDAC7-229ENST00000549883 AGO4Q9HCK5 861 aaKnown RBP11.17□□□□□ -0.62
HDAC7-229ENST00000549883 C6orf50Q9HD87 102 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 SETD4Q9NVD3 440 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 NOD1Q9Y239 953 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 LOXHD1Q8IVV2 1947 aa11.17□□□□□ -0.62
HDAC7-229ENST00000549883 SIP14410 1827 aa11.16□□□□□ -0.62
HDAC7-229ENST00000549883 CPLX1O14810 134 aa11.16□□□□□ -0.62
HDAC7-229ENST00000549883 TREHO43280 583 aa11.16□□□□□ -0.62
HDAC7-229ENST00000549883 CCNE2O96020 404 aa11.16□□□□□ -0.62
HDAC7-229ENST00000549883 FGBP02675 491 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms