RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 NFATC3Q12968 1075 aa6.92□□□□□ -1.3
CCDC38-208ENST00000549876 SLFN13Q68D06 897 aa6.92□□□□□ -1.3
CCDC38-208ENST00000549876 PROSER1Q86XN7 944 aa6.92□□□□□ -1.3
CCDC38-208ENST00000549876 ZFPM1Q8IX07 1006 aa6.92□□□□□ -1.3
CCDC38-208ENST00000549876 PPIL6Q8IXY8 311 aa6.92□□□□□ -1.3
CCDC38-208ENST00000549876 MEGF9Q9H1U4 602 aa6.92□□□□□ -1.3
CCDC38-208ENST00000549876 CDIP1Q9H305 208 aa6.92□□□□□ -1.3
CCDC38-208ENST00000549876 CAPN10Q9HC96 672 aa6.92□□□□□ -1.3
CCDC38-208ENST00000549876 CCDC9Q9Y3X0 531 aaKnown RBP6.92□□□□□ -1.3
CCDC38-208ENST00000549876 B4GALT4O60513 344 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 TCF3P15923 654 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 SELENOPP49908 381 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 C6orf15Q6UXA7 325 aaPredicted RBP6.91□□□□□ -1.3
CCDC38-208ENST00000549876 FAM178BQ8IXR5 827 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 PHOSPHO1Q8TCT1 267 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 SMOC1Q9H4F8 434 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 EPB41L1Q9H4G0 881 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 CLDND1Q9NY35 253 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 MYOTQ9UBF9 498 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 FTSJ1Q9UET6 329 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 ADAM29Q9UKF5 820 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 NPFFR2Q9Y5X5 522 aa6.91□□□□□ -1.3
CCDC38-208ENST00000549876 OVOL3O00110 214 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 DGKIO75912 1065 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 AMHP03971 560 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 ETFBP38117 255 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 SV2CQ496J9 727 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 TRMT10BQ6PF06 316 aaKnown RBP6.9□□□□□ -1.3
CCDC38-208ENST00000549876 TMC5Q6UXY8 1006 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 VPS37DQ86XT2 251 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 PALM2Q8IXS6 379 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 TMEM145Q8NBT3 493 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 BARX1Q9HBU1 254 aaPredicted RBP6.9□□□□□ -1.3
CCDC38-208ENST00000549876 JADE2Q9NQC1 790 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 RBPJLQ9UBG7 517 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 ASH2LQ9UBL3 628 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 TESMINQ9Y4I5 508 aa6.9□□□□□ -1.3
CCDC38-208ENST00000549876 B2RBV5 119 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 SUSD5O60279 629 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 ZNF623O75123 536 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 SSBP05455 408 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC38-208ENST00000549876 SLC35F1Q5T1Q4 408 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 NUDT10Q8NFP7 164 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 Q8TCH9 128 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 NUDT11Q96G61 164 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 CHAMP1Q96JM3 812 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 MENTQ9BUN1 341 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 PCED1AQ9H1Q7 454 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 SEMA4AQ9H3S1 761 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 ACTR10Q9NZ32 417 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 ZDHHC9Q9Y397 364 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 TCAF1Q9Y4C2 921 aa6.89□□□□□ -1.31
CCDC38-208ENST00000549876 KLHL18O94889 574 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 KCNJ6P48051 423 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 DTX3Q8N9I9 347 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 TTLL11Q8NHH1 800 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 MICAL1Q8TDZ2 1067 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 TINF2Q9BSI4 451 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 LRP2BPQ9P2M1 347 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 PRKAG3Q9UGI9 489 aa6.88□□□□□ -1.31
CCDC38-208ENST00000549876 MUSKO15146 869 aa6.87□□□□□ -1.31
CCDC38-208ENST00000549876 CNOT4O95628 575 aaKnown RBP6.87□□□□□ -1.31
CCDC38-208ENST00000549876 FGRP09769 529 aa6.87□□□□□ -1.31
CCDC38-208ENST00000549876 TNNI3KQ59H18 835 aa6.87□□□□□ -1.31
CCDC38-208ENST00000549876 SPDYAQ5MJ70 313 aa6.87□□□□□ -1.31
CCDC38-208ENST00000549876 MRM1Q6IN84 353 aaKnown RBP6.87□□□□□ -1.31
CCDC38-208ENST00000549876 USP51Q70EK9 711 aa6.87□□□□□ -1.31
CCDC38-208ENST00000549876 SLITRK6Q9H5Y7 841 aa6.87□□□□□ -1.31
CCDC38-208ENST00000549876 MAFKO60675 156 aa6.86□□□□□ -1.31
CCDC38-208ENST00000549876 LARP1BQ659C4 914 aaKnown RBP6.86□□□□□ -1.31
CCDC38-208ENST00000549876 Q6ZUG5 572 aa6.86□□□□□ -1.31
CCDC38-208ENST00000549876 CLEC4DQ8WXI8 215 aa6.86□□□□□ -1.31
CCDC38-208ENST00000549876 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC38-208ENST00000549876 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
CCDC38-208ENST00000549876 ZNF408Q9H9D4 720 aa6.86□□□□□ -1.31
CCDC38-208ENST00000549876 SLC6A20Q9NP91 592 aa6.86□□□□□ -1.31
CCDC38-208ENST00000549876 CHGBP05060 677 aa6.85□□□□□ -1.31
CCDC38-208ENST00000549876 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
CCDC38-208ENST00000549876 MCF2L2Q86YR7 1114 aa6.85□□□□□ -1.31
CCDC38-208ENST00000549876 TRIM48Q8IWZ4 208 aa6.85□□□□□ -1.31
CCDC38-208ENST00000549876 PIP4K2CQ8TBX8 421 aa6.85□□□□□ -1.31
CCDC38-208ENST00000549876 AJUBAQ96IF1 538 aa6.85□□□□□ -1.31
CCDC38-208ENST00000549876 SEC61A2Q9H9S3 476 aa6.85□□□□□ -1.31
CCDC38-208ENST00000549876 DLL4Q9NR61 685 aa6.85□□□□□ -1.31
CCDC38-208ENST00000549876 KRIT1O00522 736 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 SLC27A2O14975 620 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 DDAH1O94760 285 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 KNG1P01042 644 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 ARID5AQ03989 594 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 SMAD2Q15796 467 aaKnown RBP6.84□□□□□ -1.31
CCDC38-208ENST00000549876 PHF19Q5T6S3 580 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 VASNQ6EMK4 673 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 JAM3Q9BX67 310 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 PDGFDQ9GZP0 370 aaPredicted RBP6.84□□□□□ -1.31
CCDC38-208ENST00000549876 HS3ST3A1Q9Y663 406 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 SLC4A7Q9Y6M7 1214 aa6.84□□□□□ -1.31
CCDC38-208ENST00000549876 MSCO60682 206 aa6.83□□□□□ -1.32
CCDC38-208ENST00000549876 GRIA2P42262 883 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms