RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 SEL1LQ9UBV2 794 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 KLRG2A4D1S0 409 aaPredicted RBP12.84□□□□□ -0.35
VDR-206ENST00000549336 ADM5C9JUS6 153 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 PHKA2P46019 1235 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 RHBDL3P58872 404 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 MORC3Q14149 939 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 PPP4R3CPQ6ZMV5 832 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 GBP6Q6ZN66 633 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 PLEKHH3Q7Z736 793 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 NLGN2Q8NFZ4 835 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 SELENOOQ9BVL4 669 aa12.84□□□□□ -0.35
VDR-206ENST00000549336 CNTNAP5Q8WYK1 1306 aa12.83□□□□□ -0.35
VDR-206ENST00000549336 GOLGA6L10A6NI86 522 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 OAZ1P54368 228 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 MCM6Q14566 821 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 ASIC2Q16515 512 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 CCDC155Q8N6L0 562 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 PROCA1Q8NCQ7 364 aaPredicted RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 OXER1Q8TDS5 423 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 UBXN4Q92575 508 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 MIS12Q9H081 205 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 TLR3O15455 904 aaKnown RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 URI1O94763 535 aaPredicted RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 CD19P15391 556 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 PTGS1P23219 599 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 PPIL2Q13356 520 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 ZNF658Q5TYW1 1059 aaPredicted RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 SEPT1Q8WYJ6 367 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 GJA10Q969M2 543 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 ZC3H4Q9UPT8 1303 aaKnown RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 LDHAP00338 332 aaKnown RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 CYP2B6P20813 491 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 MARK3P27448 753 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 DDIT3P35638 169 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 PSMC2P35998 433 aaKnown RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 PRPF4BQ13523 1007 aaKnown RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 SNW1Q13573 536 aaKnown RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 RIT2Q99578 217 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 TIPINQ9BVW5 301 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 CCDC94Q9BW85 323 aaPredicted RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.36
VDR-206ENST00000549336 TAB2Q9NYJ8 693 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 FAM184BQ9ULE4 1060 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 NUB1Q9Y5A7 615 aa12.83□□□□□ -0.36
VDR-206ENST00000549336 STXBP3O00186 592 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 TNNT1P13805 278 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 OR6J1Q8NGC5 347 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 TSGA10Q9BZW7 698 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 TUFT1Q9NNX1 390 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
VDR-206ENST00000549336 STRCQ7RTU9 1775 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 STRNO43815 780 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 EIF3JO75822 258 aaKnown RBP12.82□□□□□ -0.36
VDR-206ENST00000549336 YY1P25490 414 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
VDR-206ENST00000549336 CATSPER4Q7RTX7 472 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 SMAP1Q8IYB5 467 aaPredicted RBP12.82□□□□□ -0.36
VDR-206ENST00000549336 SMARCAD1Q9H4L7 1026 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 TRMT1Q9NXH9 659 aaKnown RBP12.82□□□□□ -0.36
VDR-206ENST00000549336 IMPACTQ9P2X3 320 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 GABBR1Q9UBS5 961 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 MAD2L2Q9UI95 211 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 ATP2C1P98194 919 aaPredicted RBP12.82□□□□□ -0.36
VDR-206ENST00000549336 SWSAP1Q6NVH7 229 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 ANKS1AQ92625 1134 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 EMILIN3Q9NT22 766 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 GJB4Q9NTQ9 266 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 KCNJ18B7U540 433 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 GGPS1O95749 300 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 STAT5BP51692 787 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 GNG11P61952 73 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 KCNJ12Q14500 433 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 MAPK6Q16659 721 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 Q3C1V9 767 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 RDM1Q8NG50 284 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 ANKRD36BP1Q96IX9 119 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 FAM49AQ9H0Q0 323 aaPredicted RBP12.82□□□□□ -0.36
VDR-206ENST00000549336 JADE2Q9NQC1 790 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 FAM198AQ9UFP1 575 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 LTBP3Q9NS15 1303 aa12.82□□□□□ -0.36
VDR-206ENST00000549336 MYCP01106 439 aaPredicted RBP12.81□□□□□ -0.36
VDR-206ENST00000549336 NR2F2P24468 414 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 SEC23AQ15436 765 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 RESP18Q5W5W9 173 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 P2RX5Q93086 422 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 KIAA1586Q9HCI6 787 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 TDP2O95551 362 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 RARBP10826 455 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 CDC25AP30304 524 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
VDR-206ENST00000549336 XKR3Q5GH77 459 aa12.81□□□□□ -0.36
VDR-206ENST00000549336 HOOK3Q86VS8 718 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms