RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 MAN1B1Q9UKM7 699 aa13.55□□□□□ -0.24
PTPRR-209ENST00000549308 POTEB3A0JP26 581 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 EML1O00423 815 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 IGF2BP3O00425 579 aaKnown RBP eCLIP13.54□□□□□ -0.24
PTPRR-209ENST00000549308 MED24O75448 989 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 PGK2P07205 417 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
PTPRR-209ENST00000549308 INHBEP58166 350 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 PDE4DQ08499 809 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 DPYDQ12882 1025 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 CUL4BQ13620 913 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 DHX8Q14562 1220 aaKnown RBP13.54□□□□□ -0.24
PTPRR-209ENST00000549308 TAF1CQ15572 869 aaPredicted RBP13.54□□□□□ -0.24
PTPRR-209ENST00000549308 GNPTABQ3T906 1256 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 POTEBQ6S5H4 581 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 SV2BQ7L1I2 683 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 FAM133AQ8N9E0 248 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 LRRC15Q8TF66 581 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 RAD54LQ92698 747 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 EIF2AK1Q9BQI3 630 aaKnown RBP13.54□□□□□ -0.24
PTPRR-209ENST00000549308 TBC1D22BQ9NU19 505 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 KIAA1024Q9UPX6 916 aa13.54□□□□□ -0.24
PTPRR-209ENST00000549308 MAFGO15525 162 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 SARSP49591 514 aaKnown RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 AMPD3Q01432 767 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 SREBF2Q12772 1141 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 FSTL1Q12841 308 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 GRM1Q13255 1194 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 MCM6Q14566 821 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 ECM1Q16610 540 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 C11orf57Q6ZUT1 292 aaPredicted RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 MIER3Q7Z3K6 550 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 FAM200AQ8TCP9 573 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 CDHR1Q96JP9 859 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 MTRQ99707 1265 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 POLR3CQ9BUI4 534 aaPredicted RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 BLOC1S4Q9NUP1 217 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 KBTBD4Q9NVX7 518 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 ASTN1O14525 1302 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 FAM155AB1AL88 458 aaPredicted RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 EIF3JO75822 258 aaKnown RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 CAVIN2O95810 425 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 MYL1P05976 194 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 RPA1P27694 616 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 ZNF165P49910 485 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 CYP4A11Q02928 519 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 EPHA7Q15375 998 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 FAM110CQ1W6H9 321 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 DPCR1Q3MIW9 517 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 NT5DC1Q5TFE4 455 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 CATSPER3Q86XQ3 398 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 IFNL1Q8IU54 200 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 TRIML1Q8N9V2 468 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 DYDC2Q96IM9 177 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 HHIPL1Q96JK4 782 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 LRRC27Q9C0I9 530 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
PTPRR-209ENST00000549308 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 CPA4Q9UI42 421 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 IVNS1ABPQ9Y6Y0 642 aa13.53□□□□□ -0.24
PTPRR-209ENST00000549308 PLXNB2O15031 1838 aa13.52□□□□□ -0.24
PTPRR-209ENST00000549308 DNAJC25-GNG10A0A024R161 153 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 POTEFA5A3E0 1075 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 E9PMD0 336 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 DHX15O43143 795 aaKnown RBP13.52□□□□□ -0.25
PTPRR-209ENST00000549308 RPN1P04843 607 aaKnown RBP13.52□□□□□ -0.25
PTPRR-209ENST00000549308 SSBP05455 408 aaKnown RBP eCLIP13.52□□□□□ -0.25
PTPRR-209ENST00000549308 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 MORC3Q14149 939 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 KCNK18Q7Z418 384 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 SPATA20Q8TB22 786 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.25
PTPRR-209ENST00000549308 GSDMAQ96QA5 445 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 TUFT1Q9NNX1 390 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 RMND1Q9NWS8 449 aa13.52□□□□□ -0.25
PTPRR-209ENST00000549308 SPATA31C2B4DYI2 1134 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 ATP9AO75110 1047 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 RGS20O76081 388 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 SPATA31C1P0DKV0 1188 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 XRCC6P12956 609 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPRR-209ENST00000549308 EDNRBP24530 442 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 YY1P25490 414 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 CTTNQ14247 550 aaKnown RBP13.51□□□□□ -0.25
PTPRR-209ENST00000549308 UVSSAQ2YD98 709 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 B3GNT9Q6UX72 402 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 SEPT14Q6ZU15 432 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 TPH2Q8IWU9 490 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 C7orf25Q9BPX7 421 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 ZFYVE28Q9HCC9 887 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 RGL1Q9NZL6 768 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 DACH1Q9UI36 760 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 DNM3Q9UQ16 869 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 SAMM50Q9Y512 469 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 ADGRA2Q96PE1 1338 aa13.51□□□□□ -0.25
PTPRR-209ENST00000549308 ZNFX1Q9P2E3 1918 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms