RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 EGFL7Q9UHF1 273 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 SCN8AQ9UQD0 1980 aa5.56□□□□□ -1.52
SCAF11-212ENST00000549162 C3orf80F5H4A9 247 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 PPIP5K2O43314 1243 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 LZTS3O60299 673 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 ERBB2P04626 1255 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 KRT2P35908 639 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 JAK3P52333 1124 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 JAG1P78504 1218 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 SSRP1Q08945 709 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 KCNH2Q12809 1159 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 COL19A1Q14993 1142 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 SWI5Q1ZZU3 235 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 C15orf39Q6ZRI6 1047 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 PNMA1Q8ND90 353 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 SYT11Q9BT88 431 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 MMTAG2Q9BU76 263 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 HSD3B7Q9H2F3 369 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 BMP2KQ9NSY1 1161 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 TBC1D22BQ9NU19 505 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 HOXC10Q9NYD6 342 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 PNMA3Q9UL41 463 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 TTF2Q9UNY4 1162 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 COQ4Q9Y3A0 265 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 VWA5AO00534 786 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 ZNF189O75820 626 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 CASTP20810 708 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 RPA1P27694 616 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 WWC2Q6AWC2 1192 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 PPP1R2P3Q6NXS1 205 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 BEND5Q7L4P6 421 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 VSIG10LQ86VR7 867 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 CEP95Q96GE4 821 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 GBP4Q96PP9 640 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 ACBD3Q9H3P7 528 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 ZSWIM4Q9H7M6 989 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 RNF19AQ9NV58 838 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 LIMA1Q9UHB6 759 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 CETPP11597 493 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 FAM160A1Q05DH4 1040 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 TNK2Q07912 1038 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 DLGAP5Q15398 846 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 OCLNQ16625 522 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 ABCB5Q2M3G0 1257 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 SPRYD7Q5W111 196 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 CWC27Q6UX04 472 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 JAZF1Q86VZ6 243 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 BLIDQ8IZY5 108 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 OLIG1Q8TAK6 271 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 ZNF507Q8TCN5 953 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 LEO1Q8WVC0 666 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 CDCA5Q96FF9 252 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 CEP63Q96MT8 703 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 JAKMIP1Q96N16 626 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 TMX4Q9H1E5 349 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 GJD2Q9UKL4 321 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 C10orf142B7Z368 130 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 H0YCG3 227 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 C21orf2O43822 256 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 FAM189A1O60320 539 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 GAP43P17677 238 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 XBP1P17861 261 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 SFPQP23246 707 aaKnown RBP eCLIP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 MAPK4P31152 587 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 TIE1P35590 1138 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 IREB2P48200 963 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 METAP2P50579 478 aaKnown RBP eCLIP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 SLC12A3P55017 1021 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 DYNLL1P63167 89 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 FANCCQ00597 558 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 CPLX2Q6PUV4 134 aaKnown RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 PLA2G4DQ86XP0 818 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 SLF1Q9BQI6 1058 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 WDR11Q9BZH6 1224 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 FHDC1Q9C0D6 1143 aaPredicted RBP5.55□□□□□ -1.52
SCAF11-212ENST00000549162 NT5C3AQ9H0P0 336 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 CYLDQ9NQC7 956 aa5.55□□□□□ -1.52
SCAF11-212ENST00000549162 SYNRGQ9UMZ2 1314 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 ZC3H11AO75152 810 aaKnown RBP eCLIP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 PEX14O75381 377 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 TPM3P06753 285 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 PARP1P09874 1014 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 SLFN14P0C7P3 912 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 AKR1B1P15121 316 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 KCNA2P16389 499 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 DNAJA1P31689 397 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 PRSS12P56730 875 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 IGBP1P78318 339 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 EPHA7Q15375 998 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 NLGN2Q8NFZ4 835 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 HAS1Q92839 578 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 MRFAP1L1Q96HT8 127 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 SEC62Q99442 399 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 AMNQ9BXJ7 453 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 COMMD8Q9NX08 183 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 A0A1W2PRG0 241 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 ABLIM1O14639 778 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 MTA2O94776 668 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 BMP3P12645 472 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 RFC2P35250 354 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms