RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 APBB2Q92870 758 aa15.78■□□□□ 0.12
CDX2-202ENST00000548877 ATP6V0A1Q93050 837 aa15.78■□□□□ 0.12
CDX2-202ENST00000548877 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
CDX2-202ENST00000548877 JMJD4Q9H9V9 463 aa15.78■□□□□ 0.12
CDX2-202ENST00000548877 LAMA4Q16363 1823 aa15.78■□□□□ 0.12
CDX2-202ENST00000548877 C17orf102A2RUQ5 167 aa15.77■□□□□ 0.12
CDX2-202ENST00000548877 FAM26DQ5JW98 314 aa15.77■□□□□ 0.12
CDX2-202ENST00000548877 RPAINQ86UA6 219 aa15.77■□□□□ 0.12
CDX2-202ENST00000548877 ZNF589Q86UQ0 364 aaPredicted RBP15.77■□□□□ 0.12
CDX2-202ENST00000548877 MTMR8Q96EF0 704 aa15.77■□□□□ 0.12
CDX2-202ENST00000548877 POP1Q99575 1024 aaKnown RBP15.77■□□□□ 0.12
CDX2-202ENST00000548877 CLDND1Q9NY35 253 aa15.77■□□□□ 0.12
CDX2-202ENST00000548877 NEDD4P46934 1319 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 CCDC171Q6TFL3 1326 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 H3BRB1 525 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 RBAK-RBAKDNI3L0D1 243 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 TREHO43280 583 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 MBTPS2O43462 519 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 GGPS1O95749 300 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 ADAM17P78536 824 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 SP2Q02086 613 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 CLP1Q92989 425 aaKnown RBP15.76■□□□□ 0.11
CDX2-202ENST00000548877 AMNQ9BXJ7 453 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 OSBPL7Q9BZF2 842 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 RNPEPQ9H4A4 650 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 TUT1Q9H6E5 874 aaKnown RBP15.76■□□□□ 0.11
CDX2-202ENST00000548877 RC3H2Q9HBD1 1191 aaKnown RBP15.76■□□□□ 0.11
CDX2-202ENST00000548877 RWDD3Q9Y3V2 267 aa15.76■□□□□ 0.11
CDX2-202ENST00000548877 TTC3P53804 2025 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 CFBP00751 764 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 SMIM10L2AP0DMW4 78 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 SMIM10L2BP0DMW5 78 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 UBA1P22314 1058 aaKnown RBP15.75■□□□□ 0.11
CDX2-202ENST00000548877 BMPR1AP36894 532 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 PDE1AP54750 535 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 HYAL1Q12794 435 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 SMAD4Q13485 552 aaKnown RBP15.75■□□□□ 0.11
CDX2-202ENST00000548877 PGM5Q15124 567 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 IL17RAQ96F46 866 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 SNX27Q96L92 541 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 ZKSCAN3Q9BRR0 538 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 C11orf84Q9BUA3 381 aaPredicted RBP15.75■□□□□ 0.11
CDX2-202ENST00000548877 IFIH1Q9BYX4 1025 aaKnown RBP15.75■□□□□ 0.11
CDX2-202ENST00000548877 KAT14Q9H8E8 782 aa15.75■□□□□ 0.11
CDX2-202ENST00000548877 KAT6AQ92794 2004 aa15.74■□□□□ 0.11
CDX2-202ENST00000548877 UPP2O95045 317 aa15.74■□□□□ 0.11
CDX2-202ENST00000548877 LGALS2P05162 132 aa15.74■□□□□ 0.11
CDX2-202ENST00000548877 PARP1P09874 1014 aaKnown RBP15.74■□□□□ 0.11
CDX2-202ENST00000548877 DLX2Q07687 328 aaPredicted RBP15.74■□□□□ 0.11
CDX2-202ENST00000548877 NMIQ13287 307 aaPredicted RBP15.74■□□□□ 0.11
CDX2-202ENST00000548877 PKN1Q16512 942 aa15.74■□□□□ 0.11
CDX2-202ENST00000548877 RNF135Q8IUD6 432 aa15.74■□□□□ 0.11
CDX2-202ENST00000548877 FIBCD1Q8N539 461 aa15.74■□□□□ 0.11
CDX2-202ENST00000548877 ENAHQ8N8S7 591 aaPredicted RBP15.74■□□□□ 0.11
CDX2-202ENST00000548877 EDAQ92838 391 aa15.74■□□□□ 0.11
CDX2-202ENST00000548877 USP26Q9BXU7 913 aa15.74■□□□□ 0.11
CDX2-202ENST00000548877 USP34Q70CQ2 3546 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 ZNF213O14771 459 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 GRM6O15303 877 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 EYA4O95677 639 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 GNAT1P11488 350 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 MYCLP12524 364 aaPredicted RBP15.73■□□□□ 0.11
CDX2-202ENST00000548877 ICAM3P32942 547 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 CTNNB1P35222 781 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 IL31RAQ8NI17 732 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 ZSCAN10Q96SZ4 725 aaPredicted RBP15.73■□□□□ 0.11
CDX2-202ENST00000548877 PRRX2Q99811 253 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 PLVAPQ9BX97 442 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 EHMT1Q9H9B1 1298 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 MLXIPQ9HAP2 919 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 MUTYHQ9UIF7 546 aa15.73■□□□□ 0.11
CDX2-202ENST00000548877 PPP1R11O60927 126 aaPredicted RBP15.72■□□□□ 0.11
CDX2-202ENST00000548877 KDM4AO75164 1064 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 TBX10O75333 385 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 MMP1P03956 469 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 CCND2P30279 289 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 MFAP1P55081 439 aaKnown RBP15.72■□□□□ 0.11
CDX2-202ENST00000548877 ADAM15Q13444 863 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 EP400NLQ6ZTU2 488 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 ZNF689Q96CS4 500 aaPredicted RBP15.72■□□□□ 0.11
CDX2-202ENST00000548877 MSLNLQ96KJ4 702 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 VAT1LQ9HCJ6 419 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 ZSWIM5Q9P217 1185 aa15.72■□□□□ 0.11
CDX2-202ENST00000548877 FRMPD4Q14CM0 1322 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 ADGRA3Q8IWK6 1321 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 ZBTB5O15062 677 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 STAM2O75886 525 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 CTSHP09668 335 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 TRAF1Q13077 416 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 CAMK1Q14012 370 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 METTL7BQ6UX53 244 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 PRSS33Q8NF86 280 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 GPKOWQ92917 476 aaPredicted RBP eCLIP15.71■□□□□ 0.11
CDX2-202ENST00000548877 P2RX5Q93086 422 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 BCAS3Q9H6U6 928 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 CD207Q9UJ71 328 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 PCDHA1Q9Y5I3 950 aa15.71■□□□□ 0.11
CDX2-202ENST00000548877 DOCK5Q9H7D0 1870 aa15.7■□□□□ 0.1
CDX2-202ENST00000548877 SPATA31C2B4DYI2 1134 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms