RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TRIM50Q86XT4 487 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 REXO1Q8N1G1 1221 aaKnown RBP18.03■□□□□ 0.48
DDX54-205ENST00000548786 C7orf31Q8N865 590 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 ZMYND12Q9H0C1 365 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 GLT8D2Q9H1C3 349 aa18.03■□□□□ 0.48
DDX54-205ENST00000548786 LARGE1O95461 756 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 F2P00734 622 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 LGALS2P05162 132 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 KCNA2P16389 499 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 ZNF76P36508 570 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 NLRP5P59047 1200 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 PTGISQ16647 500 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 CCDC148Q8NFR7 591 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 SCLYQ96I15 445 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 GPR20Q99678 358 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 SEZ6LQ9BYH1 1024 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 WNT8AQ9H1J5 351 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 JADE2Q9NQC1 790 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
DDX54-205ENST00000548786 ESYT2A0FGR8 921 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 PFKFB2O60825 505 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 PPFIA4O75335 1185 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 SUPT20HL2P0C7V6 817 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 GNA11P29992 359 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 SREBF1P36956 1147 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 ARHGAP4P98171 946 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 ZNF200P98182 395 aaPredicted RBP18.01■□□□□ 0.47
DDX54-205ENST00000548786 ANKRD1Q15327 319 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 TMEM199Q8N511 208 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 CDHR1Q96JP9 859 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 RNPC3Q96LT9 517 aaKnown RBP18.01■□□□□ 0.47
DDX54-205ENST00000548786 MXRA8Q9BRK3 442 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 C16orf70Q9BSU1 422 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 KATNAL1Q9BW62 490 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 KCNH7Q9NS40 1196 aa18.01■□□□□ 0.47
DDX54-205ENST00000548786 DEXIO95424 95 aa18■□□□□ 0.47
DDX54-205ENST00000548786 ARP10275 920 aa18■□□□□ 0.47
DDX54-205ENST00000548786 HOXD8P13378 290 aaPredicted RBP18■□□□□ 0.47
DDX54-205ENST00000548786 PPIGQ13427 754 aaKnown RBP eCLIP18■□□□□ 0.47
DDX54-205ENST00000548786 CEP55Q53EZ4 464 aa18■□□□□ 0.47
DDX54-205ENST00000548786 SENP7Q9BQF6 1050 aa18■□□□□ 0.47
DDX54-205ENST00000548786 FAM86B1E9PN63 330 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 H3BRB1 525 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 DDX39AO00148 427 aaKnown RBP17.99■□□□□ 0.47
DDX54-205ENST00000548786 HAS3O00219 553 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 CDKL5O76039 1030 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 FAM86B2P0C5J1 330 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 PTPN11Q06124 597 aaPredicted RBP17.99■□□□□ 0.47
DDX54-205ENST00000548786 ME3Q16798 604 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 GIMAP8Q8ND71 665 aaPredicted RBP17.99■□□□□ 0.47
DDX54-205ENST00000548786 BICD2Q8TD16 824 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.99■□□□□ 0.472e-8■■□□□ 11.7
DDX54-205ENST00000548786 TUT1Q9H6E5 874 aaKnown RBP17.99■□□□□ 0.47
DDX54-205ENST00000548786 GJB4Q9NTQ9 266 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 GTF2IRD1Q9UHL9 959 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 KCNJ14Q9UNX9 436 aa17.99■□□□□ 0.47
DDX54-205ENST00000548786 CTDNEP1O95476 244 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 MARK3P27448 753 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 TCF7P36402 384 aaPredicted RBP17.98■□□□□ 0.47
DDX54-205ENST00000548786 FOSBP53539 338 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 ITGB3BPQ13352 177 aaPredicted RBP17.98■□□□□ 0.47
DDX54-205ENST00000548786 HIC1Q14526 733 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 LRIT3Q3SXY7 679 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 C16orf59Q7L2K0 433 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 DEFB128Q7Z7B8 93 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 PLA2G4DQ86XP0 818 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 CTAGE1Q96RT6 745 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 AGO4Q9HCK5 861 aaKnown RBP17.98■□□□□ 0.47
DDX54-205ENST00000548786 SH3GLB2Q9NR46 395 aa17.98■□□□□ 0.47
DDX54-205ENST00000548786 SLC34A2O95436 690 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 SMIM10L2AP0DMW4 78 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 SMIM10L2BP0DMW5 78 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 ZNF365Q70YC5 407 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 SESTD1Q86VW0 696 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 DHX38Q92620 1227 aaKnown RBP17.97■□□□□ 0.47
DDX54-205ENST00000548786 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 SDF4Q9BRK5 362 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 C22orf23Q9BZE7 217 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 JPH1Q9HDC5 661 aaPredicted RBP17.97■□□□□ 0.47
DDX54-205ENST00000548786 IL23AQ9NPF7 189 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 PCDHA4Q9UN74 947 aa17.97■□□□□ 0.47
DDX54-205ENST00000548786 SCN5AQ14524 2016 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 GSTTP1A0A1W2PQM5 241 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 MEIS1O00470 390 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 PRR16Q569H4 304 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 TMEM240Q5SV17 173 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 Q7L0L9 218 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 TEX2Q8IWB9 1127 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 RETREG2Q8NC44 543 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 SEPT1Q8WYJ6 367 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 WNT8BQ93098 351 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 ORC3Q9UBD5 711 aaPredicted RBP17.96■□□□□ 0.47
DDX54-205ENST00000548786 SLC9A2Q9UBY0 812 aa17.96■□□□□ 0.47
DDX54-205ENST00000548786 ZNF215Q9UL58 517 aaPredicted RBP17.96■□□□□ 0.47
DDX54-205ENST00000548786 C17orf102A2RUQ5 167 aa17.95■□□□□ 0.46
DDX54-205ENST00000548786 MAFGO15525 162 aa17.95■□□□□ 0.46
DDX54-205ENST00000548786 JAK2O60674 1132 aa17.95■□□□□ 0.46
DDX54-205ENST00000548786 BFSP2Q13515 415 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms