RNA–Protein interactions for RNA: ENST00000547630.1

C12orf49-203, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 1 (best)

Gene C12orf49, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-203ENST00000547630 FOXD4L1Q9NU39 408 aa23.35■■□□□ 1.33
C12orf49-203ENST00000547630 POLR3EQ9NVU0 708 aa23.35■■□□□ 1.33
C12orf49-203ENST00000547630 MKI67P46013 3256 aaKnown RBP23.34■■□□□ 1.33
C12orf49-203ENST00000547630 TDP2O95551 362 aa23.34■■□□□ 1.33
C12orf49-203ENST00000547630 SETQ01105 290 aaPredicted RBP23.34■■□□□ 1.33
C12orf49-203ENST00000547630 SP4Q02446 784 aa23.34■■□□□ 1.33
C12orf49-203ENST00000547630 LETM2Q2VYF4 491 aa23.34■■□□□ 1.33
C12orf49-203ENST00000547630 SLC39A5Q6ZMH5 540 aa23.34■■□□□ 1.33
C12orf49-203ENST00000547630 NEK8Q86SG6 692 aa23.34■■□□□ 1.33
C12orf49-203ENST00000547630 PURAQ00577 322 aaKnown RBP23.33■■□□□ 1.33
C12orf49-203ENST00000547630 LRRC26Q2I0M4 334 aa23.33■■□□□ 1.33
C12orf49-203ENST00000547630 LENG9Q96B70 501 aa23.33■■□□□ 1.33
C12orf49-203ENST00000547630 INTS4Q96HW7 963 aaKnown RBP23.33■■□□□ 1.33
C12orf49-203ENST00000547630 TELO2Q9Y4R8 837 aa23.33■■□□□ 1.33
C12orf49-203ENST00000547630 CYP3A7-CYP3A51PA0A087WV96 503 aa23.32■■□□□ 1.32
C12orf49-203ENST00000547630 CABYRO75952 493 aa23.32■■□□□ 1.32
C12orf49-203ENST00000547630 CYP3A7P24462 503 aa23.32■■□□□ 1.32
C12orf49-203ENST00000547630 ITGB3BPQ13352 177 aaPredicted RBP23.32■■□□□ 1.32
C12orf49-203ENST00000547630 GNL2Q13823 731 aaKnown RBP23.32■■□□□ 1.32
C12orf49-203ENST00000547630 DGKDQ16760 1214 aa23.32■■□□□ 1.32
C12orf49-203ENST00000547630 LARP1BQ659C4 914 aaKnown RBP23.32■■□□□ 1.32
C12orf49-203ENST00000547630 SDF4Q9BRK5 362 aa23.32■■□□□ 1.32
C12orf49-203ENST00000547630 ZNF577Q9BSK1 485 aa23.32■■□□□ 1.32
C12orf49-203ENST00000547630 FOXP1Q9H334 677 aaPredicted RBP23.32■■□□□ 1.32
C12orf49-203ENST00000547630 NFASCO94856 1347 aa23.32■■□□□ 1.32
C12orf49-203ENST00000547630 ELP1O95163 1332 aa23.32■■□□□ 1.32
C12orf49-203ENST00000547630 KIF28PB7ZC32 967 aa23.31■■□□□ 1.32
C12orf49-203ENST00000547630 H3BQV1 296 aa23.31■■□□□ 1.32
C12orf49-203ENST00000547630 NOP56O00567 594 aaKnown RBP23.31■■□□□ 1.32
C12orf49-203ENST00000547630 KPNA6O60684 536 aa23.31■■□□□ 1.32
C12orf49-203ENST00000547630 Q4G0T1 1027 aa23.31■■□□□ 1.32
C12orf49-203ENST00000547630 MOXD1Q6UVY6 613 aa23.31■■□□□ 1.32
C12orf49-203ENST00000547630 MTG1Q9BT17 334 aaPredicted RBP23.31■■□□□ 1.32
C12orf49-203ENST00000547630 IPO5O00410 1097 aaKnown RBP23.3■■□□□ 1.32
C12orf49-203ENST00000547630 CCNT1O60563 726 aaKnown RBP23.3■■□□□ 1.32
C12orf49-203ENST00000547630 PSMC6P62333 389 aa23.3■■□□□ 1.32
C12orf49-203ENST00000547630 DPF3Q92784 378 aa23.3■■□□□ 1.32
C12orf49-203ENST00000547630 MBOAT7Q96N66 472 aa23.3■■□□□ 1.32
C12orf49-203ENST00000547630 GPR20Q99678 358 aa23.3■■□□□ 1.32
C12orf49-203ENST00000547630 SLC9A2Q9UBY0 812 aa23.3■■□□□ 1.32
C12orf49-203ENST00000547630 DDX25Q9UHL0 483 aaKnown RBP23.3■■□□□ 1.32
C12orf49-203ENST00000547630 A0A0U1RQG5 324 aaPredicted RBP23.29■■□□□ 1.32
C12orf49-203ENST00000547630 DDX39AO00148 427 aaKnown RBP23.29■■□□□ 1.32
C12orf49-203ENST00000547630 MSH4O15457 936 aa23.29■■□□□ 1.32
C12orf49-203ENST00000547630 PPFIA4O75335 1185 aa23.29■■□□□ 1.32
C12orf49-203ENST00000547630 HOXD8P13378 290 aaPredicted RBP23.29■■□□□ 1.32
C12orf49-203ENST00000547630 RTP1P59025 263 aa23.29■■□□□ 1.32
C12orf49-203ENST00000547630 PPP4R3AQ6IN85 833 aa23.29■■□□□ 1.32
C12orf49-203ENST00000547630 JPH1Q9HDC5 661 aaPredicted RBP23.29■■□□□ 1.32
C12orf49-203ENST00000547630 ALPK3Q96L96 1907 aa23.29■■□□□ 1.32
C12orf49-203ENST00000547630 DHX15O43143 795 aaKnown RBP23.28■■□□□ 1.32
C12orf49-203ENST00000547630 SLC37A4O43826 429 aa23.28■■□□□ 1.32
C12orf49-203ENST00000547630 ZNF286BP0CG31 522 aa23.28■■□□□ 1.32
C12orf49-203ENST00000547630 GCFC2P16383 781 aaKnown RBP23.28■■□□□ 1.32
C12orf49-203ENST00000547630 SNX17Q15036 470 aa23.28■■□□□ 1.32
C12orf49-203ENST00000547630 MCTP1Q6DN14 999 aa23.28■■□□□ 1.32
C12orf49-203ENST00000547630 NOSTRINQ8IVI9 506 aa23.28■■□□□ 1.32
C12orf49-203ENST00000547630 NAP1L4Q99733 375 aaKnown RBP23.28■■□□□ 1.32
C12orf49-203ENST00000547630 ATP11BQ9Y2G3 1177 aa23.28■■□□□ 1.32
C12orf49-203ENST00000547630 ATP2B1P20020 1258 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 U2AF2P26368 475 aaKnown RBP eCLIP23.27■■□□□ 1.32
C12orf49-203ENST00000547630 CHMP4BP1P59074 171 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 ITGA7Q13683 1181 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 TRIM60Q495X7 471 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 UTP14CQ5TAP6 766 aaKnown RBP23.27■■□□□ 1.32
C12orf49-203ENST00000547630 SEPT1Q8WYJ6 367 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 KAT2BQ92831 832 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 GJA10Q969M2 543 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 TBC1D22BQ9NU19 505 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 GRIN2DO15399 1336 aa23.27■■□□□ 1.32
C12orf49-203ENST00000547630 GSTTP1A0A1W2PQM5 241 aa23.27■■□□□ 1.31
C12orf49-203ENST00000547630 ARVCFO00192 962 aa23.27■■□□□ 1.31
C12orf49-203ENST00000547630 WNT7AO00755 349 aa23.27■■□□□ 1.31
C12orf49-203ENST00000547630 EVI5O60447 810 aa23.27■■□□□ 1.31
C12orf49-203ENST00000547630 LGALS2P05162 132 aa23.27■■□□□ 1.31
C12orf49-203ENST00000547630 HSP90AA1P07900 732 aaKnown RBP23.27■■□□□ 1.31
C12orf49-203ENST00000547630 TCF7P36402 384 aaPredicted RBP23.27■■□□□ 1.31
C12orf49-203ENST00000547630 C1orf53Q5VUE5 145 aa23.27■■□□□ 1.31
C12orf49-203ENST00000547630 PPP1R13LQ8WUF5 828 aa23.27■■□□□ 1.31
C12orf49-203ENST00000547630 SLC5A5Q92911 643 aa23.27■■□□□ 1.31
C12orf49-203ENST00000547630 PDCP20941 246 aa23.26■■□□□ 1.31
C12orf49-203ENST00000547630 CDK7P50613 346 aa23.26■■□□□ 1.31
C12orf49-203ENST00000547630 ACTR2P61160 394 aa23.26■■□□□ 1.31
C12orf49-203ENST00000547630 NBPF20Q3BBV1 942 aa23.26■■□□□ 1.31
C12orf49-203ENST00000547630 C7orf61Q8IZ16 206 aa23.26■■□□□ 1.31
C12orf49-203ENST00000547630 SLC43A3Q8NBI5 491 aa23.26■■□□□ 1.31
C12orf49-203ENST00000547630 ETNPPLQ8TBG4 499 aa23.26■■□□□ 1.31
C12orf49-203ENST00000547630 C16orf70Q9BSU1 422 aa23.26■■□□□ 1.31
C12orf49-203ENST00000547630 SCN10AQ9Y5Y9 1956 aa23.25■■□□□ 1.31
C12orf49-203ENST00000547630 CCNE2O96020 404 aa23.25■■□□□ 1.31
C12orf49-203ENST00000547630 F2P00734 622 aa23.25■■□□□ 1.31
C12orf49-203ENST00000547630 PSEN2P49810 448 aa23.25■■□□□ 1.31
C12orf49-203ENST00000547630 TRIM50Q86XT4 487 aa23.25■■□□□ 1.31
C12orf49-203ENST00000547630 POTEDQ86YR6 584 aa23.25■■□□□ 1.31
C12orf49-203ENST00000547630 SPRYD3Q8NCJ5 442 aa23.25■■□□□ 1.31
C12orf49-203ENST00000547630 VPS37CA5D8V6 355 aaPredicted RBP23.24■■□□□ 1.31
C12orf49-203ENST00000547630 PQBP1O60828 265 aaKnown RBP23.24■■□□□ 1.31
C12orf49-203ENST00000547630 GAS7O60861 476 aa23.24■■□□□ 1.31
C12orf49-203ENST00000547630 TLE2Q04725 743 aa23.24■■□□□ 1.31
C12orf49-203ENST00000547630 MFSD10Q14728 455 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms