RNA–Protein interactions for RNA: ENST00000546962.5

TMEM116-204, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-204ENST00000546962 FILIP1Q7Z7B0 1213 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 ERO1BQ86YB8 467 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 TAB3Q8N5C8 712 aaPredicted RBP3.81□□□□□ -1.8
TMEM116-204ENST00000546962 KLHL23Q8NBE8 558 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 GALNT6Q8NCL4 622 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 APPBP2Q92624 585 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 ELMO3Q96BJ8 720 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 ZBED3Q96IU2 234 aaPredicted RBP3.81□□□□□ -1.8
TMEM116-204ENST00000546962 SLC9A7Q96T83 725 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 WDR18Q9BV38 432 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 COA1Q9GZY4 146 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 CNNM2Q9H8M5 875 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 TMEM260Q9NX78 707 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 KCNK4Q9NYG8 393 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 GMIPQ9P107 970 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 THEGQ9P2T0 379 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 PFDN2Q9UHV9 154 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 CPA4Q9UI42 421 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 ZMYM5Q9UJ78 669 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 KNSTRNQ9Y448 316 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 PCDHGC5Q9Y5F6 944 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 KDM3BQ7LBC6 1761 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 UBR2Q8IWV8 1755 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 COL6A3P12111 3177 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 TTC28Q96AY4 2481 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 PRAMEF27A3QJZ7 478 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 SHISA8B8ZZ34 492 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 PGRP06401 933 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 ELNP15502 786 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 GYS2P54840 703 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 PDE4BQ07343 736 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 VGLL4Q14135 290 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 AAK1Q2M2I8 961 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 FOXD4L6Q3SYB3 417 aaPredicted RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 C2orf27AQ580R0 203 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 ARSHQ5FYA8 562 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 RNF187Q5TA31 235 aaPredicted RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 FOXD4L3Q6VB84 417 aaPredicted RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 NLRC3Q7RTR2 1065 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 KIAA0907Q7Z7F0 614 aaPredicted RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 ANKRD23Q86SG2 305 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 HOMER1Q86YM7 354 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 ST13P5Q8NFI4 369 aaPredicted RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 DIS3LQ8TF46 1054 aaKnown RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 COA7Q96BR5 231 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 ACSF2Q96CM8 615 aaPredicted RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 HOOK2Q96ED9 719 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 PARK7Q99497 189 aaKnown RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 POLR3GLQ9BT43 218 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 USP26Q9BXU7 913 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 WNT10AQ9GZT5 417 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 PANK3Q9H999 370 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 VEZTQ9HBM0 779 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 PCDHB10Q9UN67 800 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 HIF3AQ9Y2N7 669 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 SLC12A7Q9Y666 1083 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 RANBP2P49792 3224 aaKnown RBP3.8□□□□□ -1.8
TMEM116-204ENST00000546962 DUOX1Q9NRD9 1551 aa3.8□□□□□ -1.8
TMEM116-204ENST00000546962 FAM86C2PA6NEL3 165 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 PDHXO00330 501 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 TNPO2O14787 897 aaKnown RBP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 OIP5O43482 229 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 DEAF1O75398 565 aaPredicted RBP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 SLFN14P0C7P3 912 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 NID1P14543 1247 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 CTGFP29279 349 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 CD68P34810 354 aaPredicted RBP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 RBM5P52756 815 aaKnown RBP eCLIP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 IGBP1P78318 339 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 PPATQ06203 517 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 SSRP1Q08945 709 aaKnown RBP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 PPIL2Q13356 520 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 TKFCQ3LXA3 575 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 CCDC152Q4G0S7 254 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 PPM1JQ5JR12 505 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 EXOSC6Q5RKV6 272 aaKnown RBP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 AKNAD1Q5T1N1 836 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 KIAA1211LQ6NV74 962 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 VHLLQ6RSH7 139 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 MCM10Q7L590 875 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 COPS6Q7L5N1 327 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 ANKRD18AQ8IVF6 992 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 MCATQ8IVS2 390 aaKnown RBP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 THAP3Q8WTV1 239 aaPredicted RBP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 KLHL6Q8WZ60 621 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 MXD3Q9BW11 206 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 BRINP2Q9C0B6 783 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 KCNH6Q9H252 994 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 TTYH1Q9H313 450 aaPredicted RBP3.79□□□□□ -1.8
TMEM116-204ENST00000546962 SPC25Q9HBM1 224 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 RAD18Q9NS91 495 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 TJP2Q9UDY2 1190 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 KLHL3Q9UH77 587 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 ADAM30Q9UKF2 790 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 OGDHLQ9ULD0 1010 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 PPP1R9AQ9ULJ8 1098 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 GABRQQ9UN88 632 aa3.79□□□□□ -1.8
TMEM116-204ENST00000546962 COL2A1P02458 1487 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms