RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 NFATC3Q12968 1075 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 SLFN13Q68D06 897 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 PROSER1Q86XN7 944 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 ZFPM1Q8IX07 1006 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 PPIL6Q8IXY8 311 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 MEGF9Q9H1U4 602 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 CDIP1Q9H305 208 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 CAPN10Q9HC96 672 aa6.92□□□□□ -1.3
CCDC38-204ENST00000546816 CCDC9Q9Y3X0 531 aaKnown RBP6.92□□□□□ -1.3
CCDC38-204ENST00000546816 B4GALT4O60513 344 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 TCF3P15923 654 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 SELENOPP49908 381 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 C6orf15Q6UXA7 325 aaPredicted RBP6.91□□□□□ -1.3
CCDC38-204ENST00000546816 FAM178BQ8IXR5 827 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 PHOSPHO1Q8TCT1 267 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 SMOC1Q9H4F8 434 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 EPB41L1Q9H4G0 881 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 CLDND1Q9NY35 253 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 MYOTQ9UBF9 498 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 FTSJ1Q9UET6 329 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 ADAM29Q9UKF5 820 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 NPFFR2Q9Y5X5 522 aa6.91□□□□□ -1.3
CCDC38-204ENST00000546816 OVOL3O00110 214 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 DGKIO75912 1065 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 AMHP03971 560 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 ETFBP38117 255 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 SV2CQ496J9 727 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 TRMT10BQ6PF06 316 aaKnown RBP6.9□□□□□ -1.3
CCDC38-204ENST00000546816 TMC5Q6UXY8 1006 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 VPS37DQ86XT2 251 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 PALM2Q8IXS6 379 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 TMEM145Q8NBT3 493 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 BARX1Q9HBU1 254 aaPredicted RBP6.9□□□□□ -1.3
CCDC38-204ENST00000546816 JADE2Q9NQC1 790 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 RBPJLQ9UBG7 517 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 ASH2LQ9UBL3 628 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 TESMINQ9Y4I5 508 aa6.9□□□□□ -1.3
CCDC38-204ENST00000546816 B2RBV5 119 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 SUSD5O60279 629 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 ZNF623O75123 536 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 SSBP05455 408 aaKnown RBP eCLIP6.89□□□□□ -1.31
CCDC38-204ENST00000546816 SLC35F1Q5T1Q4 408 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 NUDT10Q8NFP7 164 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 Q8TCH9 128 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 NUDT11Q96G61 164 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 CHAMP1Q96JM3 812 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 MENTQ9BUN1 341 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 PCED1AQ9H1Q7 454 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 SEMA4AQ9H3S1 761 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 ACTR10Q9NZ32 417 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 ZDHHC9Q9Y397 364 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 TCAF1Q9Y4C2 921 aa6.89□□□□□ -1.31
CCDC38-204ENST00000546816 KLHL18O94889 574 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 KCNJ6P48051 423 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 DTX3Q8N9I9 347 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 TTLL11Q8NHH1 800 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 MICAL1Q8TDZ2 1067 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 TINF2Q9BSI4 451 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 LRP2BPQ9P2M1 347 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 PRKAG3Q9UGI9 489 aa6.88□□□□□ -1.31
CCDC38-204ENST00000546816 MUSKO15146 869 aa6.87□□□□□ -1.31
CCDC38-204ENST00000546816 CNOT4O95628 575 aaKnown RBP6.87□□□□□ -1.31
CCDC38-204ENST00000546816 FGRP09769 529 aa6.87□□□□□ -1.31
CCDC38-204ENST00000546816 TNNI3KQ59H18 835 aa6.87□□□□□ -1.31
CCDC38-204ENST00000546816 SPDYAQ5MJ70 313 aa6.87□□□□□ -1.31
CCDC38-204ENST00000546816 MRM1Q6IN84 353 aaKnown RBP6.87□□□□□ -1.31
CCDC38-204ENST00000546816 USP51Q70EK9 711 aa6.87□□□□□ -1.31
CCDC38-204ENST00000546816 SLITRK6Q9H5Y7 841 aa6.87□□□□□ -1.31
CCDC38-204ENST00000546816 MAFKO60675 156 aa6.86□□□□□ -1.31
CCDC38-204ENST00000546816 LARP1BQ659C4 914 aaKnown RBP6.86□□□□□ -1.31
CCDC38-204ENST00000546816 Q6ZUG5 572 aa6.86□□□□□ -1.31
CCDC38-204ENST00000546816 CLEC4DQ8WXI8 215 aa6.86□□□□□ -1.31
CCDC38-204ENST00000546816 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC38-204ENST00000546816 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
CCDC38-204ENST00000546816 ZNF408Q9H9D4 720 aa6.86□□□□□ -1.31
CCDC38-204ENST00000546816 SLC6A20Q9NP91 592 aa6.86□□□□□ -1.31
CCDC38-204ENST00000546816 CHGBP05060 677 aa6.85□□□□□ -1.31
CCDC38-204ENST00000546816 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
CCDC38-204ENST00000546816 MCF2L2Q86YR7 1114 aa6.85□□□□□ -1.31
CCDC38-204ENST00000546816 TRIM48Q8IWZ4 208 aa6.85□□□□□ -1.31
CCDC38-204ENST00000546816 PIP4K2CQ8TBX8 421 aa6.85□□□□□ -1.31
CCDC38-204ENST00000546816 AJUBAQ96IF1 538 aa6.85□□□□□ -1.31
CCDC38-204ENST00000546816 SEC61A2Q9H9S3 476 aa6.85□□□□□ -1.31
CCDC38-204ENST00000546816 DLL4Q9NR61 685 aa6.85□□□□□ -1.31
CCDC38-204ENST00000546816 KRIT1O00522 736 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 SLC27A2O14975 620 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 DDAH1O94760 285 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 KNG1P01042 644 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 ARID5AQ03989 594 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 SMAD2Q15796 467 aaKnown RBP6.84□□□□□ -1.31
CCDC38-204ENST00000546816 PHF19Q5T6S3 580 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 VASNQ6EMK4 673 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 JAM3Q9BX67 310 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 PDGFDQ9GZP0 370 aaPredicted RBP6.84□□□□□ -1.31
CCDC38-204ENST00000546816 HS3ST3A1Q9Y663 406 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 SLC4A7Q9Y6M7 1214 aa6.84□□□□□ -1.31
CCDC38-204ENST00000546816 MSCO60682 206 aa6.83□□□□□ -1.32
CCDC38-204ENST00000546816 GRIA2P42262 883 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms