RNA–Protein interactions for RNA: ENST00000546483.1

ATXN2-216, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-216ENST00000546483 KRT12Q99456 494 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 CNOT10Q9H9A5 744 aaKnown RBP13.41□□□□□ -0.26
ATXN2-216ENST00000546483 SWAP70Q9UH65 585 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 PCDHA4Q9UN74 947 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 ATP8B3O60423 1300 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 RGPD3A6NKT7 1758 aaPredicted RBP13.41□□□□□ -0.26
ATXN2-216ENST00000546483 RGPD4Q7Z3J3 1758 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 RAD51CO43502 376 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 PDE8AO60658 829 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 PDHBP11177 359 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 CALRP27797 417 aaKnown RBP13.41□□□□□ -0.26
ATXN2-216ENST00000546483 SLC1A4P43007 532 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 IRX1P78414 480 aaPredicted RBP13.41□□□□□ -0.26
ATXN2-216ENST00000546483 QPCTQ16769 361 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 RC3H1Q5TC82 1133 aaKnown RBP13.41□□□□□ -0.26
ATXN2-216ENST00000546483 MAATS1Q7Z4T9 603 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 SEMA6BQ9H3T3 888 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 HAUS2Q9NVX0 235 aa13.41□□□□□ -0.26
ATXN2-216ENST00000546483 SERPING1P05155 500 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 NT5C2P49902 561 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 ERVK-9P63128 1117 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 AMPD3Q01432 767 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 RASSF7Q02833 373 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 LRRC63Q05C16 580 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 RRAGAQ7L523 313 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 CCHCR1Q8TD31 782 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 ACTRT1Q8TDG2 376 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 RAPGEF5Q92565 580 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 TRIM6Q9C030 488 aaPredicted RBP13.4□□□□□ -0.26
ATXN2-216ENST00000546483 LRRC4BQ9NT99 713 aa13.4□□□□□ -0.26
ATXN2-216ENST00000546483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
ATXN2-216ENST00000546483 PALMO75781 387 aa13.4□□□□□ -0.27
ATXN2-216ENST00000546483 DRD4P21917 467 aa13.4□□□□□ -0.27
ATXN2-216ENST00000546483 ELF3P78545 371 aaPredicted RBP13.4□□□□□ -0.27
ATXN2-216ENST00000546483 GFPT1Q06210 699 aaPredicted RBP13.4□□□□□ -0.27
ATXN2-216ENST00000546483 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.27
ATXN2-216ENST00000546483 CEP57Q86XR8 500 aa13.4□□□□□ -0.27
ATXN2-216ENST00000546483 KIAA0895Q8NCT3 520 aa13.4□□□□□ -0.27
ATXN2-216ENST00000546483 PBKQ96KB5 322 aa13.4□□□□□ -0.27
ATXN2-216ENST00000546483 RIOK1Q9BRS2 568 aaKnown RBP13.4□□□□□ -0.27
ATXN2-216ENST00000546483 CENPHQ9H3R5 247 aa13.4□□□□□ -0.27
ATXN2-216ENST00000546483 FAM205AQ6ZU69 1335 aa13.39□□□□□ -0.27
ATXN2-216ENST00000546483 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
ATXN2-216ENST00000546483 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
ATXN2-216ENST00000546483 ITIH4Q14624 930 aa13.39□□□□□ -0.27
ATXN2-216ENST00000546483 LRCH2Q5VUJ6 765 aa13.39□□□□□ -0.27
ATXN2-216ENST00000546483 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
ATXN2-216ENST00000546483 TLCD1Q96CP7 247 aa13.39□□□□□ -0.27
ATXN2-216ENST00000546483 FAM207AQ9NSI2 230 aaPredicted RBP13.39□□□□□ -0.27
ATXN2-216ENST00000546483 CEP72Q9P209 647 aa13.39□□□□□ -0.27
ATXN2-216ENST00000546483 SLC12A4Q9UP95 1085 aa13.39□□□□□ -0.27
ATXN2-216ENST00000546483 MYH1P12882 1939 aa13.39□□□□□ -0.27
ATXN2-216ENST00000546483 PVALEFA0A1B0GWK0 134 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 ADAMTS3O15072 1205 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 HPDP32754 393 aaPredicted RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 CLNS1AP54105 237 aaKnown RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 GRIK3Q13003 919 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 ZKSCAN8Q15776 578 aaPredicted RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 SLC18A3Q16572 532 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 C10orf76Q5T2E6 689 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 ERMARDQ5T6L9 678 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 SYNE4Q8N205 404 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 PROM2Q8N271 834 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 STAG2Q8N3U4 1231 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 CUL5Q93034 780 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 HVCN1Q96D96 273 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 TMEM60Q9H2L4 133 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 POLD4Q9HCU8 107 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 CFAP73A6NFT4 308 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 CCT8L1PA6NM43 557 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 MINDY4BA8MYZ0 360 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 F8W031 263 aaPredicted RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 CCDC188H7C350 402 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 GNPATO15228 680 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 ASAP2O43150 1006 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 BUB1O43683 1085 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 ZBTB48P10074 688 aaPredicted RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 PLCG1P19174 1290 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 KIF5BP33176 963 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 CTNNA1P35221 906 aaKnown RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 EIF3BP55884 814 aaKnown RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 ORC2Q13416 577 aaPredicted RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 TRADDQ15628 312 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 LRRC55Q6ZSA7 311 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 MMRN2Q9H8L6 949 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 NOD2Q9HC29 1040 aa13.38□□□□□ -0.27
ATXN2-216ENST00000546483 CNOT8Q9UFF9 292 aaKnown RBP13.38□□□□□ -0.27
ATXN2-216ENST00000546483 MAGEB6P1A0A0J9YX57 407 aa13.37□□□□□ -0.27
ATXN2-216ENST00000546483 TLR2O60603 784 aa13.37□□□□□ -0.27
ATXN2-216ENST00000546483 FCER1AP12319 257 aa13.37□□□□□ -0.27
ATXN2-216ENST00000546483 ALADP13716 330 aa13.37□□□□□ -0.27
ATXN2-216ENST00000546483 CABP7Q86V35 215 aa13.37□□□□□ -0.27
ATXN2-216ENST00000546483 DZIP3Q86Y13 1208 aaKnown RBP13.37□□□□□ -0.27
ATXN2-216ENST00000546483 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
ATXN2-216ENST00000546483 ANKS1AQ92625 1134 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms