RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 POTEB3A0JP26 581 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 MAFGO15525 162 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 CHMP2AO43633 222 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 MED24O75448 989 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 RPN1P04843 607 aaKnown RBP21.78■■□□□ 1.08
SKP2-208ENST00000546211 CCNA1P78396 465 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 DHX8Q14562 1220 aaKnown RBP21.78■■□□□ 1.08
SKP2-208ENST00000546211 MCM6Q14566 821 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 ECM1Q16610 540 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 POTEBQ6S5H4 581 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 RASAL3Q86YV0 1011 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 FAM43AQ8N2R8 423 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 GPRC5AQ8NFJ5 357 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 PARK7Q99497 189 aaKnown RBP21.78■■□□□ 1.08
SKP2-208ENST00000546211 C7orf25Q9BPX7 421 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 EIF2AK1Q9BQI3 630 aaKnown RBP21.78■■□□□ 1.08
SKP2-208ENST00000546211 POLR3CQ9BUI4 534 aaPredicted RBP21.78■■□□□ 1.08
SKP2-208ENST00000546211 TBC1D22BQ9NU19 505 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 PKD2L1Q9P0L9 805 aa21.78■■□□□ 1.08
SKP2-208ENST00000546211 EML1O00423 815 aa21.77■■□□□ 1.08
SKP2-208ENST00000546211 KCTD2Q14681 263 aa21.77■■□□□ 1.08
SKP2-208ENST00000546211 RGMBQ6NW40 437 aa21.77■■□□□ 1.08
SKP2-208ENST00000546211 SAPCD2Q86UD0 394 aa21.77■■□□□ 1.08
SKP2-208ENST00000546211 CATSPER3Q86XQ3 398 aa21.77■■□□□ 1.08
SKP2-208ENST00000546211 KCTD17Q8N5Z5 321 aa21.77■■□□□ 1.08
SKP2-208ENST00000546211 CCDC47Q96A33 483 aaKnown RBP21.77■■□□□ 1.08
SKP2-208ENST00000546211 MMP19Q99542 508 aa21.77■■□□□ 1.08
SKP2-208ENST00000546211 UNC45AQ9H3U1 944 aa21.77■■□□□ 1.08
SKP2-208ENST00000546211 BMP6P22004 513 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 ALDH5A1P51649 535 aaPredicted RBP21.76■■□□□ 1.07
SKP2-208ENST00000546211 CNTN2Q02246 1040 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 SEMA3FQ13275 785 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 STXBP2Q15833 593 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 GNPTABQ3T906 1256 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 WDR78Q5VTH9 848 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 KCNK18Q7Z418 384 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 AOPEPQ8N6M6 819 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 SMC1BQ8NDV3 1235 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 CDHR1Q96JP9 859 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 INPP4AQ96PE3 977 aaPredicted RBP21.76■■□□□ 1.07
SKP2-208ENST00000546211 TRIM9Q9C026 710 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 TUFT1Q9NNX1 390 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 TCEAL9Q9UHQ7 104 aa21.76■■□□□ 1.07
SKP2-208ENST00000546211 MANSC4A6NHS7 340 aaPredicted RBP21.75■■□□□ 1.07
SKP2-208ENST00000546211 SMTNL1A8MU46 457 aa21.75■■□□□ 1.07
SKP2-208ENST00000546211 B4DLN1 442 aa21.75■■□□□ 1.07
SKP2-208ENST00000546211 SPATA31C1P0DKV0 1188 aa21.75■■□□□ 1.07
SKP2-208ENST00000546211 KCNB1Q14721 858 aa21.75■■□□□ 1.07
SKP2-208ENST00000546211 EPHA7Q15375 998 aa21.75■■□□□ 1.07
SKP2-208ENST00000546211 B3GNT9Q6UX72 402 aa21.75■■□□□ 1.07
SKP2-208ENST00000546211 DHX40Q8IX18 779 aaKnown RBP21.75■■□□□ 1.07
SKP2-208ENST00000546211 MPHOSPH6Q99547 160 aaKnown RBP21.75■■□□□ 1.07
SKP2-208ENST00000546211 POTEFA5A3E0 1075 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 E9PMD0 336 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 DDX39AO00148 427 aaKnown RBP21.74■■□□□ 1.07
SKP2-208ENST00000546211 DHX15O43143 795 aaKnown RBP21.74■■□□□ 1.07
SKP2-208ENST00000546211 FCER1AP12319 257 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 ASIC1P78348 528 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 CYP4A11Q02928 519 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 ITGB3BPQ13352 177 aaPredicted RBP21.74■■□□□ 1.07
SKP2-208ENST00000546211 POTEGQ6S5H5 508 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 ANKRD13CQ8N6S4 541 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 FAM133AQ8N9E0 248 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 NEK9Q8TD19 979 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 PTPN18Q99952 460 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 MORF4L1Q9UBU8 362 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 DNM3Q9UQ16 869 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 KIF3CO14782 793 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 EIF3JO75822 258 aaKnown RBP21.74■■□□□ 1.07
SKP2-208ENST00000546211 MUTP22033 750 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 TPM4P67936 248 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 PLCB2Q00722 1185 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 CT47A1Q5JQC4 288 aaPredicted RBP21.74■■□□□ 1.07
SKP2-208ENST00000546211 MIER3Q7Z3K6 550 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 DYDC2Q96IM9 177 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 HSD17B14Q9BPX1 270 aa21.74■■□□□ 1.07
SKP2-208ENST00000546211 LCTP09848 1927 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 SOWAHBA6NEL2 793 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 SSBP05455 408 aaKnown RBP eCLIP21.73■■□□□ 1.07
SKP2-208ENST00000546211 PLA2G4BP0C869 781 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 PDE4DQ08499 809 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 CCDC173Q0VFZ6 552 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 KMT5BQ4FZB7 885 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 ZNF658Q5TYW1 1059 aaPredicted RBP21.73■■□□□ 1.07
SKP2-208ENST00000546211 GTPBP4Q9BZE4 634 aaKnown RBP21.73■■□□□ 1.07
SKP2-208ENST00000546211 R3HDMLQ9H3Y0 253 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 BMP2KQ9NSY1 1161 aaPredicted RBP21.73■■□□□ 1.07
SKP2-208ENST00000546211 RGL1Q9NZL6 768 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 TLL2Q9Y6L7 1015 aa21.73■■□□□ 1.07
SKP2-208ENST00000546211 MYMKA6NI61 221 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 IKBKBO14920 756 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 KLRC4O43908 158 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 SLITRK3O94933 977 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 SLC10A3P09131 477 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 KRT76Q01546 638 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 TPH2Q8IWU9 490 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 PORCNQ9H237 461 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 EFCC1Q9HA90 598 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 EXOC1Q9NV70 894 aa21.72■■□□□ 1.07
SKP2-208ENST00000546211 ASTN1O14525 1302 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms