RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 EMID1Q96A84 441 aaPredicted RBP12.17□□□□□ -0.46
PAAF1-216ENST00000546039 ZNF333Q96JL9 665 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 TEKT3Q9BXF9 490 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 MCOLN1Q9GZU1 580 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 TMEM60Q9H2L4 133 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 DDX20Q9UHI6 824 aaKnown RBP12.17□□□□□ -0.46
PAAF1-216ENST00000546039 GNEQ9Y223 722 aaKnown RBP12.17□□□□□ -0.46
PAAF1-216ENST00000546039 Q9Y3F1 56 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 CLIC4Q9Y696 253 aa12.17□□□□□ -0.46
PAAF1-216ENST00000546039 ADCY6O43306 1168 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 ATP9AO75110 1047 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 PSMD10O75832 226 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 FARP2O94887 1054 aaPredicted RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 CCL5P13501 91 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 KRT76Q01546 638 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 SP2Q02086 613 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 DNM1Q05193 864 aaKnown RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 ARHGAP1Q07960 439 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 ITGB3BPQ13352 177 aaPredicted RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 LAMC2Q13753 1193 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 STK38Q15208 465 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 TMEM266Q2M3C6 531 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 FOXD4L6Q3SYB3 417 aaPredicted RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 CELF3Q5SZQ8 465 aaKnown RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 ARL6IP4Q66PJ3 421 aaKnown RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 METTL7BQ6UX53 244 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 FOXD4L3Q6VB84 417 aaPredicted RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 C4orf32Q8N8J7 132 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 OR6J1Q8NGC5 347 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 HAS1Q92839 578 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 FTOQ9C0B1 505 aaKnown RBP eCLIP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 UNC93B1Q9H1C4 597 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 UPF3AQ9H1J1 476 aaKnown RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 JPH1Q9HDC5 661 aaPredicted RBP12.16□□□□□ -0.46
PAAF1-216ENST00000546039 PKD2L1Q9P0L9 805 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 CENPFP49454 3210 aa12.16□□□□□ -0.46
PAAF1-216ENST00000546039 DHX15O43143 795 aaKnown RBP12.15□□□□□ -0.46
PAAF1-216ENST00000546039 NCLP19338 710 aaKnown RBP12.15□□□□□ -0.46
PAAF1-216ENST00000546039 CEBPZQ03701 1054 aaKnown RBP12.15□□□□□ -0.46
PAAF1-216ENST00000546039 PPP2R5CQ13362 524 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 SLC39A14Q15043 492 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 PTPAQ15257 358 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 GJC2Q5T442 439 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-216ENST00000546039 ZNF746Q6NUN9 644 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-216ENST00000546039 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 LINC00301Q8NCQ3 95 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 KCNG4Q8TDN1 519 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 COPS5Q92905 334 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 LENG1Q96BZ8 264 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-216ENST00000546039 RAB34Q9BZG1 259 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 AP5M1Q9H0R1 490 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 MLXIPQ9HAP2 919 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 PAK6Q9NQU5 681 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-216ENST00000546039 SLC9A2Q9UBY0 812 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 MYH11P35749 1972 aa12.15□□□□□ -0.46
PAAF1-216ENST00000546039 TRIP12Q14669 1992 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-216ENST00000546039 ELP1O95163 1332 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 SYNRGQ9UMZ2 1314 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 DDX39AO00148 427 aaKnown RBP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 NOP56O00567 594 aaKnown RBP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 SFNP31947 248 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 TXKP42681 527 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 CPT1AP50416 773 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 FXR2P51116 673 aaKnown RBP eCLIP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 JAK3P52333 1124 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 GJA9P57773 515 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 NKX3-2P78367 333 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 MTFR1Q15390 333 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 TMEM63BQ5T3F8 832 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 DTHD1Q6ZMT9 781 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 RDM1Q8NG50 284 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 PPTC7Q8NI37 304 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 TNPO1Q92973 898 aaKnown RBP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 FERMT2Q96AC1 680 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 SPATA33Q96N06 139 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 UIMC1Q96RL1 719 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 SCAND2PQ9GZW5 306 aaPredicted RBP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 RNF208Q9H0X6 261 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 TTC12Q9H892 705 aaPredicted RBP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 XPNPEP3Q9NQH7 507 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 TFIP11Q9UBB9 837 aaKnown RBP12.14□□□□□ -0.47
PAAF1-216ENST00000546039 VAV3Q9UKW4 847 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 PCDHA12Q9UN75 941 aa12.14□□□□□ -0.47
PAAF1-216ENST00000546039 EVPLQ92817 2033 aa12.13□□□□□ -0.47
PAAF1-216ENST00000546039 WDR64B1ANS9 1081 aa12.13□□□□□ -0.47
PAAF1-216ENST00000546039 SPTLC2O15270 562 aa12.13□□□□□ -0.47
PAAF1-216ENST00000546039 DYNC1LI2O43237 492 aaPredicted RBP12.13□□□□□ -0.47
PAAF1-216ENST00000546039 PPP6R2O75170 966 aa12.13□□□□□ -0.47
PAAF1-216ENST00000546039 CST5P28325 142 aaPredicted RBP12.13□□□□□ -0.47
PAAF1-216ENST00000546039 SPIRE1Q08AE8 756 aa12.13□□□□□ -0.47
PAAF1-216ENST00000546039 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
PAAF1-216ENST00000546039 LEO1Q8WVC0 666 aaPredicted RBP12.13□□□□□ -0.47
PAAF1-216ENST00000546039 GJA10Q969M2 543 aa12.13□□□□□ -0.47
PAAF1-216ENST00000546039 SPATA32Q96LK8 384 aa12.13□□□□□ -0.47
PAAF1-216ENST00000546039 UNC45AQ9H3U1 944 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms