RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IFNL3Q8IZI9 196 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 TXNDC5Q8NBS9 432 aaKnown RBP7.46□□□□□ -1.22
SNHG1-224ENST00000545688 KCNJ15Q99712 375 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 RBPJLQ9UBG7 517 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 PFDN2Q9UHV9 154 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 ADCY3O60266 1144 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 ZNF28P17035 718 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 RASGRF1Q13972 1273 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 MTERF2Q49AM1 385 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 PRAMEF18Q5VWM3 479 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 TMC5Q6UXY8 1006 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNHG1-224ENST00000545688 CLEC4DQ8WXI8 215 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 CLIC6Q96NY7 704 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 KRTAP4-2Q9BYR5 136 aa7.45□□□□□ -1.22
SNHG1-224ENST00000545688 SOD2P04179 222 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 GNAT1P11488 350 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 KRTAP10-2P60368 255 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 SSRP1Q08945 709 aaKnown RBP7.44□□□□□ -1.22
SNHG1-224ENST00000545688 NBPF6Q5VWK0 638 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 TRIM48Q8IWZ4 208 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 TTLL11Q8NHH1 800 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 NBPF4Q96M43 638 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 CCDC113Q9H0I3 377 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 CROTQ9UKG9 612 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 TRAF6Q9Y4K3 522 aa7.44□□□□□ -1.22
SNHG1-224ENST00000545688 MROH6A6NGR9 719 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 NKRFO15226 690 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNHG1-224ENST00000545688 DIAPH1O60610 1272 aaKnown RBP7.43□□□□□ -1.22
SNHG1-224ENST00000545688 LTFP02788 710 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 GTF2F1P35269 517 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNHG1-224ENST00000545688 MLLT6P55198 1093 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-224ENST00000545688 SPIRE1Q08AE8 756 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 TUSC3Q13454 348 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 HABP4Q5JVS0 413 aaKnown RBP7.43□□□□□ -1.22
SNHG1-224ENST00000545688 FOXB2Q5VYV0 432 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 PROSER1Q86XN7 944 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 UHMK1Q8TAS1 419 aaKnown RBP7.43□□□□□ -1.22
SNHG1-224ENST00000545688 C8orf37Q96NL8 207 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 TMEM209Q96SK2 561 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 KRTAP4-11Q9BYQ6 195 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
SNHG1-224ENST00000545688 K7ESM1 405 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 IL13P35225 146 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 NFKB2Q00653 900 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 KIAA2012Q0VF49 1180 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 EFEMP1Q12805 493 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 FAM209AQ5JX71 171 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 ZCCHC14Q8WYQ9 949 aaKnown RBP7.42□□□□□ -1.22
SNHG1-224ENST00000545688 LCORQ96JN0 433 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-224ENST00000545688 CDC6Q99741 560 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 HSPBP1Q9NZL4 362 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 SIRPGQ9P1W8 387 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 INVSQ9Y283 1065 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 TELO2Q9Y4R8 837 aa7.42□□□□□ -1.22
SNHG1-224ENST00000545688 TRBV23-1A0A0A0MS06 115 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 FAM47E-STBD1D6RA91 191 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 PAN2Q504Q3 1202 aaKnown RBP7.41□□□□□ -1.22
SNHG1-224ENST00000545688 PHF19Q5T6S3 580 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 DPH6Q7L8W6 267 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 FAM124AQ86V42 546 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 SCUBE1Q8IWY4 988 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 LGI4Q8N135 537 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 ZBTB38Q8NAP3 1195 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-224ENST00000545688 YTHDC1Q96MU7 727 aaKnown RBP7.41□□□□□ -1.22
SNHG1-224ENST00000545688 WRNIP1Q96S55 665 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 ALG1Q9BT22 464 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 L2HGDHQ9H9P8 463 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 DSEQ9UL01 958 aa7.41□□□□□ -1.22
SNHG1-224ENST00000545688 C9orf118A6NHY6 69 aa7.4□□□□□ -1.22
SNHG1-224ENST00000545688 CYP1A1P04798 512 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-224ENST00000545688 FAHP16930 419 aa7.4□□□□□ -1.22
SNHG1-224ENST00000545688 SERINC3Q13530 473 aa7.4□□□□□ -1.22
SNHG1-224ENST00000545688 SPATS1Q496A3 300 aa7.4□□□□□ -1.22
SNHG1-224ENST00000545688 TBC1D10BQ4KMP7 808 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-224ENST00000545688 VASNQ6EMK4 673 aa7.4□□□□□ -1.22
SNHG1-224ENST00000545688 BORAQ6PGQ7 559 aa7.4□□□□□ -1.22
SNHG1-224ENST00000545688 RBM15Q96T37 977 aaKnown RBP eCLIP7.4□□□□□ -1.22
SNHG1-224ENST00000545688 CYP7B1O75881 506 aa7.39□□□□□ -1.23
SNHG1-224ENST00000545688 ITGB3P05106 788 aa7.39□□□□□ -1.23
SNHG1-224ENST00000545688 C6orf222P0C671 652 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-224ENST00000545688 FAM153BP0C7A2 387 aa7.39□□□□□ -1.23
SNHG1-224ENST00000545688 SUMO1P63165 101 aaKnown RBP7.39□□□□□ -1.23
SNHG1-224ENST00000545688 MAMDC2Q7Z304 686 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-224ENST00000545688 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-224ENST00000545688 MTDHQ86UE4 582 aaKnown RBP7.39□□□□□ -1.23
SNHG1-224ENST00000545688 DTX3Q8N9I9 347 aa7.39□□□□□ -1.23
SNHG1-224ENST00000545688 MBD6Q96DN6 1003 aa7.39□□□□□ -1.23
SNHG1-224ENST00000545688 EXOC2Q96KP1 924 aa7.39□□□□□ -1.23
SNHG1-224ENST00000545688 HIRIP3Q9BW71 556 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-224ENST00000545688 CNOT11Q9UKZ1 510 aaKnown RBP7.39□□□□□ -1.23
SNHG1-224ENST00000545688 NUB1Q9Y5A7 615 aa7.39□□□□□ -1.23
SNHG1-224ENST00000545688 B4GALT3O60512 393 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 PLATP00750 562 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 ADRB1P08588 477 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 RASA3Q14644 834 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 TRMT10BQ6PF06 316 aaKnown RBP7.38□□□□□ -1.23
SNHG1-224ENST00000545688 HHIPL2Q6UWX4 724 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 KCTD1Q719H9 257 aa7.38□□□□□ -1.23
SNHG1-224ENST00000545688 SH3RF2Q8TEC5 729 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms