RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 ZNF76P36508 570 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 ALDH5A1P51649 535 aaPredicted RBP10.87□□□□□ -0.67
CIT-216ENST00000544872 HSD17B4P51659 736 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 SCRN1Q12765 414 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 GNL2Q13823 731 aaKnown RBP10.87□□□□□ -0.67
CIT-216ENST00000544872 MFSD5Q6N075 450 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 C16orf59Q7L2K0 433 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 RNF180Q86T96 592 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 NLRX1Q86UT6 975 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 SYTL5Q8TDW5 730 aaPredicted RBP10.87□□□□□ -0.67
CIT-216ENST00000544872 ARNTL2Q8WYA1 636 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 GTF3C6Q969F1 213 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 CDHR1Q96JP9 859 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 UBE2ZQ9H832 354 aaPredicted RBP10.87□□□□□ -0.67
CIT-216ENST00000544872 RIC8AQ9NPQ8 531 aa10.87□□□□□ -0.67
CIT-216ENST00000544872 CNTNAP5Q8WYK1 1306 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 REV3LO60673 3130 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 H0Y858 1186 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 NKRFO15226 690 aaKnown RBP eCLIP10.86□□□□□ -0.67
CIT-216ENST00000544872 EIF2AK2P19525 551 aaKnown RBP10.86□□□□□ -0.67
CIT-216ENST00000544872 HOXA13P31271 388 aaPredicted RBP10.86□□□□□ -0.67
CIT-216ENST00000544872 AP3B2Q13367 1082 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 TTLL4Q14679 1199 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 ME3Q16798 604 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 LEXMQ3ZCV2 418 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 WWC2Q6AWC2 1192 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 ADSSL1Q8N142 457 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 REXO1Q8N1G1 1221 aaKnown RBP10.86□□□□□ -0.67
CIT-216ENST00000544872 NECAB1Q8N987 351 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 SCFD2Q8WU76 684 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 GPKOWQ92917 476 aaPredicted RBP eCLIP10.86□□□□□ -0.67
CIT-216ENST00000544872 TLR9Q9NR96 1032 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 FAM217BQ9NTX9 383 aaPredicted RBP10.86□□□□□ -0.67
CIT-216ENST00000544872 TCEAL9Q9UHQ7 104 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 PCDHA11Q9Y5I1 949 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 NID2Q14112 1375 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 PHIPQ8WWQ0 1821 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 CHD9Q3L8U1 2897 aa10.86□□□□□ -0.67
CIT-216ENST00000544872 ESYT2A0FGR8 921 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 STXBP3O00186 592 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 PPP1R11O60927 126 aaPredicted RBP10.85□□□□□ -0.67
CIT-216ENST00000544872 NR3C2P08235 984 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 TNFAIP2Q03169 654 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 FUT2Q10981 343 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 COL9A3Q14050 684 aaPredicted RBP10.85□□□□□ -0.67
CIT-216ENST00000544872 CCDC83Q8IWF9 413 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 HSCBQ8IWL3 235 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 GIMAP8Q8ND71 665 aaPredicted RBP10.85□□□□□ -0.67
CIT-216ENST00000544872 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.85□□□□□ -0.67
CIT-216ENST00000544872 TAAR1Q96RJ0 339 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 NAP1L4Q99733 375 aaKnown RBP10.85□□□□□ -0.67
CIT-216ENST00000544872 ALG1Q9BT22 464 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 PXMP2Q9NR77 195 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 FLRT1Q9NZU1 646 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 COL4A6Q14031 1691 aa10.85□□□□□ -0.67
CIT-216ENST00000544872 STK36Q9NRP7 1315 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 CFAP47Q6ZTR5 3102 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 MAP1BP46821 2468 aaKnown RBP10.84□□□□□ -0.67
CIT-216ENST00000544872 LAMA4Q16363 1823 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 MYH8P13535 1937 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 GREB1LQ9C091 1923 aaPredicted RBP10.84□□□□□ -0.67
CIT-216ENST00000544872 FAM208BQ5VWN6 2430 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 GVINP1Q7Z2Y8 2422 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 PROB1E7EW31 1015 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 MAFGO15525 162 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 DUSP11O75319 330 aaKnown RBP10.84□□□□□ -0.67
CIT-216ENST00000544872 FGBP02675 491 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 TGFB3P10600 412 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 GHRHRQ02643 423 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 FAAP100Q0VG06 881 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 LRRC41Q15345 812 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 NTRK3Q16288 839 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 CCDC144BQ3MJ40 725 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 PRAMEF19Q5SWL8 479 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 SEPT14Q6ZU15 432 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 EEPD1Q7L9B9 569 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 OTOP2Q7RTS6 562 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 PCSK9Q8NBP7 692 aaKnown RBP10.84□□□□□ -0.67
CIT-216ENST00000544872 VTI1AQ96AJ9 217 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 RMDN1Q96DB5 314 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 WDR11Q9BZH6 1224 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 ZMYND12Q9H0C1 365 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 XPNPEP3Q9NQH7 507 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 DAXXQ9UER7 740 aaPredicted RBP10.84□□□□□ -0.67
CIT-216ENST00000544872 PCDHA6Q9UN73 950 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 SMC3Q9UQE7 1217 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 PCDHA8Q9Y5H6 950 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 MRVI1Q9Y6F6 885 aa10.84□□□□□ -0.67
CIT-216ENST00000544872 CCDC194A0A1B0GVG4 234 aa10.83□□□□□ -0.68
CIT-216ENST00000544872 EPOPA6NHQ4 379 aa10.83□□□□□ -0.68
CIT-216ENST00000544872 ZBBXA8MT70 800 aa10.83□□□□□ -0.68
CIT-216ENST00000544872 H3BQV1 296 aa10.83□□□□□ -0.68
CIT-216ENST00000544872 MARCH6O60337 910 aa10.83□□□□□ -0.68
CIT-216ENST00000544872 KPNA6O60684 536 aa10.83□□□□□ -0.68
CIT-216ENST00000544872 SNAI1O95863 264 aaPredicted RBP10.83□□□□□ -0.68
CIT-216ENST00000544872 TXNP10599 105 aaKnown RBP10.83□□□□□ -0.68
CIT-216ENST00000544872 CYBAP13498 195 aa10.83□□□□□ -0.68
CIT-216ENST00000544872 PDCP20941 246 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms