RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 SKIV2LQ15477 1246 aaKnown RBP16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 CATIPQ7Z7H3 387 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 SPZ1Q9BXG8 430 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 TUT1Q9H6E5 874 aaKnown RBP16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 MLXIPQ9HAP2 919 aa16.05■□□□□ 0.16
SEMA4D-224ENST00000544513 LINC01553A4QN01 128 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 PIK3CDO00329 1044 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 SMIM10L2AP0DMW4 78 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 SMIM10L2BP0DMW5 78 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 THPOP40225 353 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 GNPTABQ3T906 1256 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 PLEKHG4Q58EX7 1191 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 METTL7BQ6UX53 244 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 USP26Q9BXU7 913 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 LY9Q9HBG7 655 aa16.04■□□□□ 0.16
SEMA4D-224ENST00000544513 COL4A4P53420 1690 aaPredicted RBP16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 C17orf102A2RUQ5 167 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 DDAH1O94760 285 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 NEDD9Q14511 834 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 XRRA1Q6P2D8 792 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 DBF4BQ8NFT6 615 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 ATP6V0A1Q93050 837 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 HLA-CQ95604 372 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 TGS1Q96RS0 853 aaKnown RBP16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 GPR20Q99678 358 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 SENP7Q9BQF6 1050 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 MTA3Q9BTC8 594 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 RNPEPQ9H4A4 650 aa16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 SUPT16HQ9Y5B9 1047 aaKnown RBP16.03■□□□□ 0.16
SEMA4D-224ENST00000544513 MEIS2O14770 477 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 TREHO43280 583 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 FIBPO43427 364 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 CAND2O75155 1236 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 ADAM17P78536 824 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 HTRA4P83105 476 aaPredicted RBP16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 PCNX4Q63HM2 1172 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 CYFIP1Q7L576 1253 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 ZNF654Q8IZM8 581 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 GDPD5Q8WTR4 605 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 LZTS2Q9BRK4 669 aa16.02■□□□□ 0.16
SEMA4D-224ENST00000544513 MICAL3Q7RTP6 2002 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 NOP56O00567 594 aaKnown RBP16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 COL9A1P20849 921 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 KIF5BP33176 963 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 USP17L6PQ6QN14 398 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 SP7Q8TDD2 431 aaPredicted RBP16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 PIBF1Q8WXW3 757 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 RRP36Q96EU6 259 aaKnown RBP16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 OSBPL7Q9BZF2 842 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 RTEL1Q9NZ71 1219 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 MTUS1Q9ULD2 1270 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 TELO2Q9Y4R8 837 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 INSL6Q9Y581 213 aa16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 RBM8AQ9Y5S9 174 aaKnown RBP16.01■□□□□ 0.15
SEMA4D-224ENST00000544513 AMHP03971 560 aa16■□□□□ 0.15
SEMA4D-224ENST00000544513 COL9A3Q14050 684 aaPredicted RBP16■□□□□ 0.15
SEMA4D-224ENST00000544513 FAM117BQ6P1L5 589 aa16■□□□□ 0.15
SEMA4D-224ENST00000544513 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
SEMA4D-224ENST00000544513 MYL10Q9BUA6 226 aa16■□□□□ 0.15
SEMA4D-224ENST00000544513 SETD4Q9NVD3 440 aa16■□□□□ 0.15
SEMA4D-224ENST00000544513 SIP14410 1827 aa16■□□□□ 0.15
SEMA4D-224ENST00000544513 SH2B2O14492 632 aaPredicted RBP15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 PRC1O43663 620 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 GNAT1P11488 350 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 FAM26DQ5JW98 314 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 TRIM50Q86XT4 487 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 SRBD1Q8N5C6 995 aaKnown RBP15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 SMARCC2Q8TAQ2 1214 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 LMBR1Q8WVP7 490 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 SEPT8Q92599 483 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 TOP1MTQ969P6 601 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 C17orf80Q9BSJ5 609 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 DOCK5Q9H7D0 1870 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 COL4A6Q14031 1691 aa15.99■□□□□ 0.15
SEMA4D-224ENST00000544513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 PLEKHA8P1O95397 391 aa15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 MCM5P33992 734 aa15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 LIFRP42702 1097 aa15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 GNAQP50148 359 aa15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 RPAINQ86UA6 219 aa15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 MYOCDQ8IZQ8 938 aa15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 GIMAP8Q8ND71 665 aaPredicted RBP15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 CUL5Q93034 780 aa15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 SEC63Q9UGP8 760 aaKnown RBP15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 ZNF215Q9UL58 517 aaPredicted RBP15.98■□□□□ 0.15
SEMA4D-224ENST00000544513 NRCAMQ92823 1304 aa15.97■□□□□ 0.15
SEMA4D-224ENST00000544513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.97■□□□□ 0.15
SEMA4D-224ENST00000544513 CTSHP09668 335 aa15.97■□□□□ 0.15
SEMA4D-224ENST00000544513 KCNA2P16389 499 aa15.97■□□□□ 0.15
SEMA4D-224ENST00000544513 CASC1Q6TDU7 716 aa15.97■□□□□ 0.15
SEMA4D-224ENST00000544513 NLRX1Q86UT6 975 aa15.97■□□□□ 0.15
SEMA4D-224ENST00000544513 FBXO22Q8NEZ5 403 aa15.97■□□□□ 0.15
SEMA4D-224ENST00000544513 GPRASP2Q96D09 838 aa15.97■□□□□ 0.15
SEMA4D-224ENST00000544513 TMEM87BQ96K49 555 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms