RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 B4E1Z4 1266 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 ZNF213O14771 459 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 PARP1P09874 1014 aaKnown RBP18.02■□□□□ 0.48
CD4-212ENST00000544344 SMIM10L2AP0DMW4 78 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 SMIM10L2BP0DMW5 78 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 NT5C2P49902 561 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 MRE11P49959 708 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 CCDC178Q5BJE1 867 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 SEPT8Q92599 483 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 ZFP91Q96JP5 570 aaPredicted RBP18.02■□□□□ 0.48
CD4-212ENST00000544344 FBXL18Q96ME1 805 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 YME1L1Q96TA2 773 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 AMNQ9BXJ7 453 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 RNPEPQ9H4A4 650 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 NSUN3Q9H649 340 aaKnown RBP18.02■□□□□ 0.48
CD4-212ENST00000544344 PRKAG3Q9UGI9 489 aa18.02■□□□□ 0.48
CD4-212ENST00000544344 H3BRB1 525 aa18.01■□□□□ 0.47
CD4-212ENST00000544344 DHX16O60231 1041 aaKnown RBP18.01■□□□□ 0.47
CD4-212ENST00000544344 UPP2O95045 317 aa18.01■□□□□ 0.47
CD4-212ENST00000544344 TGFB3P10600 412 aa18.01■□□□□ 0.47
CD4-212ENST00000544344 HOXA13P31271 388 aaPredicted RBP18.01■□□□□ 0.47
CD4-212ENST00000544344 CSPP1Q1MSJ5 1256 aa18.01■□□□□ 0.47
CD4-212ENST00000544344 SLC35G1Q2M3R5 365 aa18.01■□□□□ 0.47
CD4-212ENST00000544344 CTC1Q2NKJ3 1217 aa18.01■□□□□ 0.47
CD4-212ENST00000544344 TUT1Q9H6E5 874 aaKnown RBP18.01■□□□□ 0.47
CD4-212ENST00000544344 MAP3K20Q9NYL2 800 aaKnown RBP18.01■□□□□ 0.47
CD4-212ENST00000544344 DOCK5Q9H7D0 1870 aa18.01■□□□□ 0.47
CD4-212ENST00000544344 CAND2O75155 1236 aa18■□□□□ 0.47
CD4-212ENST00000544344 LGALS2P05162 132 aa18■□□□□ 0.47
CD4-212ENST00000544344 CTSHP09668 335 aa18■□□□□ 0.47
CD4-212ENST00000544344 SDSP20132 328 aa18■□□□□ 0.47
CD4-212ENST00000544344 ADHFE1Q8IWW8 467 aa18■□□□□ 0.47
CD4-212ENST00000544344 C5orf67F2Z3F1 127 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 IRS1P35568 1242 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 ADAM17P78536 824 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 DLX2Q07687 328 aaPredicted RBP17.99■□□□□ 0.47
CD4-212ENST00000544344 HFE2Q6ZVN8 426 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 RPAINQ86UA6 219 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 IFIH1Q9BYX4 1025 aaKnown RBP17.99■□□□□ 0.47
CD4-212ENST00000544344 KCNH6Q9H252 994 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 MLXIPQ9HAP2 919 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 CLDND1Q9NY35 253 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 ZBTB47Q9UFB7 747 aaPredicted RBP17.99■□□□□ 0.47
CD4-212ENST00000544344 PCDHA1Q9Y5I3 950 aa17.99■□□□□ 0.47
CD4-212ENST00000544344 TRIM6-TRIM34B2RNG4 842 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 KLRF2D3W0D1 207 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 ZBTB5O15062 677 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 MFAP1P55081 439 aaKnown RBP17.98■□□□□ 0.47
CD4-212ENST00000544344 FAM26DQ5JW98 314 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 EP400NLQ6ZTU2 488 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 SAMD3Q8N6K7 520 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 RILPL2Q969X0 211 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 RC3H2Q9HBD1 1191 aaKnown RBP17.98■□□□□ 0.47
CD4-212ENST00000544344 SETD4Q9NVD3 440 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 MAD2L2Q9UI95 211 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 FAM50BQ9Y247 325 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 TELO2Q9Y4R8 837 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 TECTAO75443 2155 aa17.98■□□□□ 0.47
CD4-212ENST00000544344 BAZ2BQ9UIF8 2168 aaKnown RBP17.97■□□□□ 0.47
CD4-212ENST00000544344 CCND2P30279 289 aa17.97■□□□□ 0.47
CD4-212ENST00000544344 MRPS9P82933 396 aaKnown RBP17.97■□□□□ 0.47
CD4-212ENST00000544344 HYAL1Q12794 435 aa17.97■□□□□ 0.47
CD4-212ENST00000544344 SEMA3FQ13275 785 aa17.97■□□□□ 0.47
CD4-212ENST00000544344 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
CD4-212ENST00000544344 SEC23AQ15436 765 aa17.97■□□□□ 0.47
CD4-212ENST00000544344 SMAD2Q15796 467 aaKnown RBP17.97■□□□□ 0.47
CD4-212ENST00000544344 IL17RAQ96F46 866 aa17.97■□□□□ 0.47
CD4-212ENST00000544344 PALM3A6NDB9 673 aaPredicted RBP17.96■□□□□ 0.47
CD4-212ENST00000544344 GRM6O15303 877 aa17.96■□□□□ 0.47
CD4-212ENST00000544344 ICAM3P32942 547 aa17.96■□□□□ 0.47
CD4-212ENST00000544344 TRIM50Q86XT4 487 aa17.96■□□□□ 0.47
CD4-212ENST00000544344 APBB2Q92870 758 aa17.96■□□□□ 0.47
CD4-212ENST00000544344 GPR20Q99678 358 aa17.96■□□□□ 0.47
CD4-212ENST00000544344 USP26Q9BXU7 913 aa17.96■□□□□ 0.47
CD4-212ENST00000544344 FRMPD4Q14CM0 1322 aa17.96■□□□□ 0.46
CD4-212ENST00000544344 SPATA31C2B4DYI2 1134 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 GCOM1H8Y6P7 765 aaPredicted RBP17.95■□□□□ 0.46
CD4-212ENST00000544344 MBTPS2O43462 519 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 NCK2O43639 380 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 TBX10O75333 385 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 CHRNA1P02708 482 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 RB1P06400 928 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 POLR2MP0CAP2 368 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 CTNNB1P35222 781 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 GTF2F1P35269 517 aaKnown RBP eCLIP17.95■□□□□ 0.46
CD4-212ENST00000544344 BMPR1AP36894 532 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 CLUL1Q15846 466 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 HERC4Q5GLZ8 1057 aaPredicted RBP17.95■□□□□ 0.46
CD4-212ENST00000544344 CWC27Q6UX04 472 aaKnown RBP17.95■□□□□ 0.46
CD4-212ENST00000544344 METTL7BQ6UX53 244 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 FIBCD1Q8N539 461 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 LMBR1Q8WVP7 490 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 CLP1Q92989 425 aaKnown RBP17.95■□□□□ 0.46
CD4-212ENST00000544344 INPP4AQ96PE3 977 aaPredicted RBP17.95■□□□□ 0.46
CD4-212ENST00000544344 LNPKQ9C0E8 428 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 LMAN2LQ9H0V9 348 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 EHMT1Q9H9B1 1298 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 MUTYHQ9UIF7 546 aa17.95■□□□□ 0.46
CD4-212ENST00000544344 SUPT16HQ9Y5B9 1047 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms