RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 UBA1P22314 1058 aaKnown RBP11.08□□□□□ -0.64
C2CD3-220ENST00000544293 TIGD5Q53EQ6 642 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 RPAINQ86UA6 219 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 MCF2L2Q86YR7 1114 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 RNF135Q8IUD6 432 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 CRIPAKQ8N1N5 446 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 STAG2Q8N3U4 1231 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 SPATA33Q96N06 139 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 SAMD11Q96NU1 681 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 CRBNQ96SW2 442 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 VAT1LQ9HCJ6 419 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 CLDND1Q9NY35 253 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 SUPT16HQ9Y5B9 1047 aaKnown RBP11.08□□□□□ -0.64
C2CD3-220ENST00000544293 TRIP12Q14669 1992 aaPredicted RBP11.08□□□□□ -0.64
C2CD3-220ENST00000544293 ZMYM6O95789 1325 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 EMSYQ7Z589 1322 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 ZNF318Q5VUA4 2279 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 TANC1Q9C0D5 1861 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 GGPS1O95749 300 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 CHRNA1P02708 482 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 BMPR1AP36894 532 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 PDE1AP54750 535 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 TCF15Q12870 199 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 NMIQ13287 307 aaPredicted RBP11.07□□□□□ -0.64
C2CD3-220ENST00000544293 CLUL1Q15846 466 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 CSPP1Q1MSJ5 1256 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 FAM26DQ5JW98 314 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 MFSD6Q6ZSS7 791 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 PNMA1Q8ND90 353 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 SEPT8Q92599 483 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 ATP6V0A1Q93050 837 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 ZNF689Q96CS4 500 aaPredicted RBP11.07□□□□□ -0.64
C2CD3-220ENST00000544293 MSLNLQ96KJ4 702 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 YME1L1Q96TA2 773 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 SETD4Q9NVD3 440 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 CLEC1BQ9P126 229 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 MRPL11Q9Y3B7 192 aaKnown RBP11.07□□□□□ -0.64
C2CD3-220ENST00000544293 TECTAO75443 2155 aa11.07□□□□□ -0.64
C2CD3-220ENST00000544293 C17orf102A2RUQ5 167 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 H3BRB1 525 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 ENPP3O14638 875 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 CFBP00751 764 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 LGALS2P05162 132 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 CTSHP09668 335 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 MYCLP12524 364 aaPredicted RBP11.06□□□□□ -0.64
C2CD3-220ENST00000544293 DNAJB1P25685 340 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 HOXA13P31271 388 aaPredicted RBP11.06□□□□□ -0.64
C2CD3-220ENST00000544293 MRPS9P82933 396 aaKnown RBP11.06□□□□□ -0.64
C2CD3-220ENST00000544293 ADAM15Q13444 863 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 PGM5Q15124 567 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 EP400NLQ6ZTU2 488 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 BMP8AQ7Z5Y6 402 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 RTN4RL1Q86UN2 441 aaPredicted RBP11.06□□□□□ -0.64
C2CD3-220ENST00000544293 ENAHQ8N8S7 591 aaPredicted RBP11.06□□□□□ -0.64
C2CD3-220ENST00000544293 EDAQ92838 391 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 CLP1Q92989 425 aaKnown RBP11.06□□□□□ -0.64
C2CD3-220ENST00000544293 TUT1Q9H6E5 874 aaKnown RBP11.06□□□□□ -0.64
C2CD3-220ENST00000544293 EHMT1Q9H9B1 1298 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 ZSWIM5Q9P217 1185 aa11.06□□□□□ -0.64
C2CD3-220ENST00000544293 KDM4AO75164 1064 aa11.05□□□□□ -0.64
C2CD3-220ENST00000544293 EYA4O95677 639 aa11.05□□□□□ -0.64
C2CD3-220ENST00000544293 RB1P06400 928 aa11.05□□□□□ -0.64
C2CD3-220ENST00000544293 TGFB3P10600 412 aa11.05□□□□□ -0.64
C2CD3-220ENST00000544293 PCP11498 1178 aaKnown RBP11.05□□□□□ -0.64
C2CD3-220ENST00000544293 MGAT3Q09327 533 aa11.05□□□□□ -0.64
C2CD3-220ENST00000544293 IL17RAQ96F46 866 aa11.05□□□□□ -0.64
C2CD3-220ENST00000544293 MFSD14AQ96MC6 490 aa11.05□□□□□ -0.64
C2CD3-220ENST00000544293 GPR20Q99678 358 aa11.05□□□□□ -0.64
C2CD3-220ENST00000544293 IFIH1Q9BYX4 1025 aaKnown RBP11.05□□□□□ -0.64
C2CD3-220ENST00000544293 SPATA31C2B4DYI2 1134 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 LOC730098B7Z3J9 87 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 NCK2O43639 380 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 CAND2O75155 1236 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 ICAM3P32942 547 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
C2CD3-220ENST00000544293 CBX2Q14781 532 aaPredicted RBP11.04□□□□□ -0.64
C2CD3-220ENST00000544293 ASPRV1Q53RT3 343 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 RUFY4Q6ZNE9 571 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 TRIM67Q6ZTA4 783 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 ADGRD2Q7Z7M1 963 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 TRIM50Q86XT4 487 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 FIBCD1Q8N539 461 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 LINC01599Q8WXQ3 324 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 ESR2Q92731 530 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 ZSCAN10Q96SZ4 725 aaPredicted RBP11.04□□□□□ -0.64
C2CD3-220ENST00000544293 AMNQ9BXJ7 453 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 UPF3BQ9BZI7 483 aaKnown RBP11.04□□□□□ -0.64
C2CD3-220ENST00000544293 MAD2L2Q9UI95 211 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 PLAGL2Q9UPG8 496 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 CCDC171Q6TFL3 1326 aa11.04□□□□□ -0.64
C2CD3-220ENST00000544293 PALM3A6NDB9 673 aaPredicted RBP11.03□□□□□ -0.64
C2CD3-220ENST00000544293 B4E1Z4 1266 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 CYTH3O43739 400 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 PARP1P09874 1014 aaKnown RBP11.03□□□□□ -0.64
C2CD3-220ENST00000544293 CTNNB1P35222 781 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 LPIN1Q14693 890 aa11.03□□□□□ -0.64
C2CD3-220ENST00000544293 SEC23AQ15436 765 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms