RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 NTRK3Q16288 839 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 PKN1Q16512 942 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 GPRASP2Q96D09 838 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 SENP7Q9BQF6 1050 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 ZSWIM6Q9HCJ5 1215 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 STXBP5LQ9Y2K9 1186 aa21.34■■□□□ 1.01
TMED3-204ENST00000543455 hCG_1984214I3L0E3 225 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 DNAJB2P25686 324 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 PSMA5P28066 241 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 HOXC8P31273 242 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 CLK2P49760 499 aaKnown RBP21.33■■□□□ 1.01
TMED3-204ENST00000543455 RBL2Q08999 1139 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 PFKFB3Q16875 520 aaPredicted RBP21.33■■□□□ 1.01
TMED3-204ENST00000543455 TRIM71Q2Q1W2 868 aaKnown RBP21.33■■□□□ 1.01
TMED3-204ENST00000543455 RUFY3Q7L099 469 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 DEFB128Q7Z7B8 93 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 ZNF713Q8N859 430 aaPredicted RBP21.33■■□□□ 1.01
TMED3-204ENST00000543455 C7orf31Q8N865 590 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 CHD9Q3L8U1 2897 aa21.33■■□□□ 1.01
TMED3-204ENST00000543455 SPDYE3A6NKU9 549 aa21.32■■□□□ 1
TMED3-204ENST00000543455 ADCY7P51828 1080 aa21.32■■□□□ 1
TMED3-204ENST00000543455 TRAF7Q6Q0C0 670 aa21.32■■□□□ 1
TMED3-204ENST00000543455 NLRX1Q86UT6 975 aa21.32■■□□□ 1
TMED3-204ENST00000543455 TRIM50Q86XT4 487 aa21.32■■□□□ 1
TMED3-204ENST00000543455 PBX4Q9BYU1 374 aa21.32■■□□□ 1
TMED3-204ENST00000543455 TMEM260Q9NX78 707 aa21.32■■□□□ 1
TMED3-204ENST00000543455 NOD1Q9Y239 953 aa21.32■■□□□ 1
TMED3-204ENST00000543455 PTPRSQ13332 1948 aa21.32■■□□□ 1
TMED3-204ENST00000543455 EYSQ5T1H1 3165 aa21.32■■□□□ 1
TMED3-204ENST00000543455 SMCO2A6NFE2 343 aa21.32■■□□□ 1
TMED3-204ENST00000543455 PDIA3P30101 505 aaKnown RBP21.32■■□□□ 1
TMED3-204ENST00000543455 BFSP2Q13515 415 aa21.32■■□□□ 1
TMED3-204ENST00000543455 RPUSD2Q8IZ73 545 aaKnown RBP21.32■■□□□ 1
TMED3-204ENST00000543455 CYP2W1Q8TAV3 490 aa21.32■■□□□ 1
TMED3-204ENST00000543455 CAGE1Q8TC20 777 aa21.32■■□□□ 1
TMED3-204ENST00000543455 CDX2Q99626 313 aaPredicted RBP21.32■■□□□ 1
TMED3-204ENST00000543455 JADE2Q9NQC1 790 aa21.32■■□□□ 1
TMED3-204ENST00000543455 H3BRB1 525 aa21.31■■□□□ 1
TMED3-204ENST00000543455 PPFIA3O75145 1194 aa21.31■■□□□ 1
TMED3-204ENST00000543455 SCG2P13521 617 aa21.31■■□□□ 1
TMED3-204ENST00000543455 SP4Q02446 784 aa21.31■■□□□ 1
TMED3-204ENST00000543455 AFAP1L1Q8TED9 768 aa21.31■■□□□ 1
TMED3-204ENST00000543455 PHKBQ93100 1093 aa21.31■■□□□ 1
TMED3-204ENST00000543455 ANO3Q9BYT9 981 aa21.31■■□□□ 1
TMED3-204ENST00000543455 TM6SF1Q9BZW5 370 aa21.31■■□□□ 1
TMED3-204ENST00000543455 TUT1Q9H6E5 874 aaKnown RBP21.31■■□□□ 1
TMED3-204ENST00000543455 NCOA5Q9HCD5 579 aaKnown RBP21.31■■□□□ 1
TMED3-204ENST00000543455 TMEM265A0A087WTH1 108 aa21.3■■□□□ 1
TMED3-204ENST00000543455 CCDC196A0A1B0GTZ2 297 aa21.3■■□□□ 1
TMED3-204ENST00000543455 NOP56O00567 594 aaKnown RBP21.3■■□□□ 1
TMED3-204ENST00000543455 PRPF3O43395 683 aaKnown RBP21.3■■□□□ 1
TMED3-204ENST00000543455 PFKMP08237 780 aa21.3■■□□□ 1
TMED3-204ENST00000543455 CKBP12277 381 aa21.3■■□□□ 1
TMED3-204ENST00000543455 RFC2P35250 354 aa21.3■■□□□ 1
TMED3-204ENST00000543455 PTK7Q13308 1070 aa21.3■■□□□ 1
TMED3-204ENST00000543455 TEX2Q8IWB9 1127 aa21.3■■□□□ 1
TMED3-204ENST00000543455 RETREG2Q8NC44 543 aa21.3■■□□□ 1
TMED3-204ENST00000543455 UPF3BQ9BZI7 483 aaKnown RBP21.3■■□□□ 1
TMED3-204ENST00000543455 MYO9BQ13459 2157 aa21.3■■□□□ 1
TMED3-204ENST00000543455 SMIM10L2AP0DMW4 78 aa21.29■■□□□ 1
TMED3-204ENST00000543455 SMIM10L2BP0DMW5 78 aa21.29■■□□□ 1
TMED3-204ENST00000543455 CCT2P78371 535 aaKnown RBP21.29■■□□□ 1
TMED3-204ENST00000543455 MTMR1Q13613 665 aa21.29■■□□□ 1
TMED3-204ENST00000543455 TCTN1Q2MV58 587 aa21.29■■□□□ 1
TMED3-204ENST00000543455 TIFAQ96CG3 184 aa21.29■■□□□ 1
TMED3-204ENST00000543455 MXRA8Q9BRK3 442 aa21.29■■□□□ 1
TMED3-204ENST00000543455 LARP6Q9BRS8 491 aaKnown RBP21.29■■□□□ 1
TMED3-204ENST00000543455 PKD2L1Q9P0L9 805 aa21.29■■□□□ 1
TMED3-204ENST00000543455 CHD7Q9P2D1 2997 aa21.28■■□□□ 1
TMED3-204ENST00000543455 GSTTP1A0A1W2PQM5 241 aa21.28■■□□□ 1
TMED3-204ENST00000543455 FOSP01100 380 aaPredicted RBP21.28■■□□□ 1
TMED3-204ENST00000543455 SELPP16109 830 aa21.28■■□□□ 1
TMED3-204ENST00000543455 IFNAR1P17181 557 aa21.28■■□□□ 1
TMED3-204ENST00000543455 SREBF1P36956 1147 aa21.28■■□□□ 1
TMED3-204ENST00000543455 MBTPS1Q14703 1052 aa21.28■■□□□ 1
TMED3-204ENST00000543455 LRRC8DQ7L1W4 858 aa21.28■■□□□ 1
TMED3-204ENST00000543455 SERINC5Q86VE9 423 aa21.28■■□□□ 1
TMED3-204ENST00000543455 CCDC155Q8N6L0 562 aa21.28■■□□□ 1
TMED3-204ENST00000543455 CRYGNQ8WXF5 182 aa21.28■■□□□ 1
TMED3-204ENST00000543455 CDHR1Q96JP9 859 aa21.28■■□□□ 1
TMED3-204ENST00000543455 RNPEPQ9H4A4 650 aa21.28■■□□□ 1
TMED3-204ENST00000543455 YBX2Q9Y2T7 364 aaKnown RBP21.28■■□□□ 1
TMED3-204ENST00000543455 ESYT2A0FGR8 921 aa21.27■■□□□ 1
TMED3-204ENST00000543455 NBNO60934 754 aa21.27■■□□□ 1
TMED3-204ENST00000543455 AP3B2Q13367 1082 aa21.27■■□□□ 1
TMED3-204ENST00000543455 GRIN2CQ14957 1233 aa21.27■■□□□ 1
TMED3-204ENST00000543455 UTP14CQ5TAP6 766 aaKnown RBP21.27■■□□□ 1
TMED3-204ENST00000543455 GIMAP8Q8ND71 665 aaPredicted RBP21.27■■□□□ 1
TMED3-204ENST00000543455 MYLIPQ8WY64 445 aa21.27■■□□□ 1
TMED3-204ENST00000543455 ZMYND12Q9H0C1 365 aa21.27■■□□□ 1
TMED3-204ENST00000543455 MTIF3Q9H2K0 278 aaKnown RBP21.27■■□□□ 1
TMED3-204ENST00000543455 EHMT1Q9H9B1 1298 aa21.27■■□□□ 1
TMED3-204ENST00000543455 KCNH7Q9NS40 1196 aa21.27■■□□□ 1
TMED3-204ENST00000543455 CYP46A1Q9Y6A2 500 aa21.27■■□□□ 1
TMED3-204ENST00000543455 KAT6AQ92794 2004 aa21.27■■□□□ 1
TMED3-204ENST00000543455 TREHO43280 583 aa21.26■□□□□ 0.99
TMED3-204ENST00000543455 ARP10275 920 aa21.26■□□□□ 0.99
TMED3-204ENST00000543455 TCF7P36402 384 aaPredicted RBP21.26■□□□□ 0.99
TMED3-204ENST00000543455 RABGGTBP53611 331 aa21.26■□□□□ 0.99
TMED3-204ENST00000543455 ADAM17P78536 824 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms