RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 RTEL1Q9NZ71 1219 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 GTF2IRD1Q9UHL9 959 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 UBIAD1Q9Y5Z9 338 aa11.76□□□□□ -0.53
NPIPB4-217ENST00000543449 hCG_1642624A0A1W2PR95 340 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 H3BRB1 525 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 CPA1P15085 419 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 CHMP4BP1P59074 171 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 RBL2Q08999 1139 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 PTK7Q13308 1070 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 UBE2SQ16763 222 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 TMEM240Q5SV17 173 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 CYFIP1Q7L576 1253 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 NIPA1Q7RTP0 329 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 DEFB123Q8N688 67 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 HERVK_113Q902F9 699 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 ALG1Q9BT22 464 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 ANO3Q9BYT9 981 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 ZMYND12Q9H0C1 365 aa11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 TUT1Q9H6E5 874 aaKnown RBP11.75□□□□□ -0.53
NPIPB4-217ENST00000543449 CAND2O75155 1236 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 LGALS2P05162 132 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 RPLP2P05387 115 aaKnown RBP11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 ZNF76P36508 570 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 SREBF1P36956 1147 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 CCL23P55773 120 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 SP2Q02086 613 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 SSRP1Q08945 709 aaKnown RBP11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 RAB30Q15771 203 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 GALNT17Q6IS24 598 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 ZNF365Q70YC5 407 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 REXO1Q8N1G1 1221 aaKnown RBP11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 SEPT1Q8WYJ6 367 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 GPR20Q99678 358 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 MXRA8Q9BRK3 442 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 SDF4Q9BRK5 362 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 C16orf70Q9BSU1 422 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 HDAC6Q9UBN7 1215 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 TCEAL9Q9UHQ7 104 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 NFASCO94856 1347 aa11.74□□□□□ -0.53
NPIPB4-217ENST00000543449 C17orf102A2RUQ5 167 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 EFCAB14O75071 495 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 DEXIO95424 95 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 CYP3A4P08684 503 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 ZNF286BP0CG31 522 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 CYP2C9P11712 490 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 SELPP16109 830 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 XBP1P17861 261 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 ITGB5P18084 799 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 CLK2P49760 499 aaKnown RBP11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 EPHB4P54760 987 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 SETQ01105 290 aaPredicted RBP11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 SEMA3FQ13275 785 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 CEP55Q53EZ4 464 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 RASIP1Q5U651 963 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 GDF6Q6KF10 455 aaPredicted RBP11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 SLC26A6Q9BXS9 759 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 SMARCAD1Q9H4L7 1026 aa11.73□□□□□ -0.53
NPIPB4-217ENST00000543449 EMSYQ7Z589 1322 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 BAIAP3O94812 1187 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 IQCF3P0C7M6 154 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 KCNA2P16389 499 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 CCT2P78371 535 aaKnown RBP11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 ARHGAP4P98171 946 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 NTRK3Q16288 839 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 IL27Q8NEV9 243 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 PHOSPHO2Q8TCD6 241 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 WASF1Q92558 559 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 IL17RAQ96F46 866 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 UPF3BQ9BZI7 483 aaKnown RBP11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 SLKQ9H2G2 1235 aaPredicted RBP11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 JPH1Q9HDC5 661 aaPredicted RBP11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 KCNH7Q9NS40 1196 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 ERAP1Q9NZ08 941 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 SLC9A2Q9UBY0 812 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 MSRAQ9UJ68 235 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 SLC4A7Q9Y6M7 1214 aa11.72□□□□□ -0.53
NPIPB4-217ENST00000543449 UMODL1Q5DID0 1318 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 NRCAMQ92823 1304 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 MEIS1O00470 390 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 ACRP10323 421 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 TCF7P36402 384 aaPredicted RBP11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 SLC26A2P50443 739 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 NLRP5P59047 1200 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 PKN1Q16512 942 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 FAM43BQ6ZT52 329 aaPredicted RBP11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 C16orf59Q7L2K0 433 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 RSPH3Q86UC2 560 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 ATP6V0A1Q93050 837 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 PHKBQ93100 1093 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 SCLYQ96I15 445 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 ZFP91Q96JP5 570 aaPredicted RBP11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 SLC9A7Q96T83 725 aa11.71□□□□□ -0.53
NPIPB4-217ENST00000543449 FTOQ9C0B1 505 aaKnown RBP eCLIP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms