RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 JADE2Q9NQC1 790 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 DLL4Q9NR61 685 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 PRKAG3Q9UGI9 489 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 ST6GALNAC2Q9UJ37 374 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 TCAF1Q9Y4C2 921 aa3.93□□□□□ -1.78
KNTC1-213ENST00000542727 GPR42O15529 346 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 TBX1O43435 398 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 SUV39H1O43463 412 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 FZD7O75084 574 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 FSHBP01225 129 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 LRG1P02750 347 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 MLLT6P55198 1093 aaPredicted RBP3.92□□□□□ -1.78
KNTC1-213ENST00000542727 NFATC3Q12968 1075 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 GNL2Q13823 731 aaKnown RBP3.92□□□□□ -1.78
KNTC1-213ENST00000542727 VASNQ6EMK4 673 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 TRMT10BQ6PF06 316 aaKnown RBP3.92□□□□□ -1.78
KNTC1-213ENST00000542727 CRIP3Q6Q6R5 217 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 RSPO2Q6UXX9 243 aaPredicted RBP3.92□□□□□ -1.78
KNTC1-213ENST00000542727 TMEM145Q8NBT3 493 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 C1orf159Q96HA4 380 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 ZSWIM3Q96MP5 696 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 PDGFDQ9GZP0 370 aaPredicted RBP3.92□□□□□ -1.78
KNTC1-213ENST00000542727 DEF6Q9H4E7 631 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 SLC6A20Q9NP91 592 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 GPR27Q9NS67 375 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 ASH2LQ9UBL3 628 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 FBXL7Q9UJT9 491 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 ADAM29Q9UKF5 820 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 CROTQ9UKG9 612 aa3.92□□□□□ -1.78
KNTC1-213ENST00000542727 PATE3B3GLJ2 98 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 ARNTLO00327 626 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 MUSKO15146 869 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 DDAH1O94760 285 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 ICAM4Q14773 271 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 CDSNQ15517 529 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 PRSS53Q2L4Q9 553 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 RALYLQ86SE5 291 aaKnown RBP3.91□□□□□ -1.78
KNTC1-213ENST00000542727 REXO1L1PQ8IX06 675 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 IGDCC4Q8TDY8 1250 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 ZNF428Q96B54 188 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 LGR4Q9BXB1 951 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 SEC61A2Q9H9S3 476 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 TESMINQ9Y4I5 508 aa3.91□□□□□ -1.78
KNTC1-213ENST00000542727 CAPNS1P04632 268 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 LCP1P13796 627 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 ACVRL1P37023 503 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 RBM25P49756 843 aaKnown RBP3.9□□□□□ -1.79
KNTC1-213ENST00000542727 HMGA2P52926 109 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 SMAD2Q15796 467 aaKnown RBP3.9□□□□□ -1.79
KNTC1-213ENST00000542727 HS1BP3Q53T59 392 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 SPRED1Q7Z699 444 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 IFNL2Q8IZJ0 200 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 DTX3Q8N9I9 347 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 ZFYVE21Q9BQ24 234 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 VPS11Q9H270 941 aa3.9□□□□□ -1.79
KNTC1-213ENST00000542727 B2RBV5 119 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 B4GALT4O60513 344 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 KLHL18O94889 574 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 FBXO21O94952 628 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 COL6A1P12109 1028 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 PPP2R2AP63151 447 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 SPIRE1Q08AE8 756 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 SF1Q15637 639 aaKnown RBP3.89□□□□□ -1.79
KNTC1-213ENST00000542727 KIZQ2M2Z5 673 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 SLC10A6Q3KNW5 377 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 MRM1Q6IN84 353 aaKnown RBP3.89□□□□□ -1.79
KNTC1-213ENST00000542727 DENND5AQ6IQ26 1287 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 TMC5Q6UXY8 1006 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 Q6ZUG5 572 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 DPH6Q7L8W6 267 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 OTOP3Q7RTS5 596 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 SGSM3Q96HU1 749 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 AJUBAQ96IF1 538 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 MEGF9Q9H1U4 602 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 CDIP1Q9H305 208 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 KIAA1522Q9P206 1035 aaPredicted RBP3.89□□□□□ -1.79
KNTC1-213ENST00000542727 MRVI1Q9Y6F6 885 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 SLC4A7Q9Y6M7 1214 aa3.89□□□□□ -1.79
KNTC1-213ENST00000542727 IQCA1LA6NCM1 817 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 UNCXA6NJT0 531 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 ZNF623O75123 536 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 ENO2P09104 434 aaPredicted RBP3.88□□□□□ -1.79
KNTC1-213ENST00000542727 GRK2P25098 689 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 GRK3P35626 688 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 HSP90AA2PQ14568 343 aaPredicted RBP3.88□□□□□ -1.79
KNTC1-213ENST00000542727 R3HDM1Q15032 1099 aaKnown RBP3.88□□□□□ -1.79
KNTC1-213ENST00000542727 ZNF568Q3ZCX4 644 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 ZNF585AQ6P3V2 769 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 PROSER1Q86XN7 944 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 UHMK1Q8TAS1 419 aaKnown RBP3.88□□□□□ -1.79
KNTC1-213ENST00000542727 PIP4K2CQ8TBX8 421 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 DCAF4Q8WV16 495 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.88□□□□□ -1.791e-10■■□□□ 11.4
KNTC1-213ENST00000542727 ZNF747Q9BV97 191 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 MSL2Q9HCI7 577 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 ZDHHC9Q9Y397 364 aa3.88□□□□□ -1.79
KNTC1-213ENST00000542727 R3HCC1Q9Y3T6 440 aaKnown RBP3.88□□□□□ -1.79
KNTC1-213ENST00000542727 SLC27A2O14975 620 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 CUTAO60888 179 aa3.87□□□□□ -1.79
KNTC1-213ENST00000542727 GJB6O95452 261 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms