RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 FAM177A1Q8N128 213 aaPredicted RBP17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 REXO1Q8N1G1 1221 aaKnown RBP17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 CCDC148Q8NFR7 591 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 CYP2W1Q8TAV3 490 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 CTAGE1Q96RT6 745 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 GPR20Q99678 358 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 KATNAL1Q9BW62 490 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 HIPK3Q9H422 1215 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 VPS54Q9P1Q0 977 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 TELO2Q9Y4R8 837 aa17.66■□□□□ 0.42
ECHDC2-223ENST00000542552 MEIS1O00470 390 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 CYP3A4P08684 503 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 CYP2C18P33260 490 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 NEK4P51957 841 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 ARHGAP4P98171 946 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 MFSD10Q14728 455 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 CEP55Q53EZ4 464 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 C9orf50Q5SZB4 431 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 NIPA1Q7RTP0 329 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 BICD2Q8TD16 824 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 KCNH7Q9NS40 1196 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 UMODL1Q5DID0 1318 aa17.65■□□□□ 0.42
ECHDC2-223ENST00000542552 CDKL5O76039 1030 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 LGALS2P05162 132 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 CYP2C9P11712 490 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 KIAA0753Q2KHM9 967 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 GDF6Q6KF10 455 aaPredicted RBP17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 C16orf59Q7L2K0 433 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 TMEM199Q8N511 208 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 HDAC6Q9UBN7 1215 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 GTF2IRD1Q9UHL9 959 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 STK36Q9NRP7 1315 aa17.64■□□□□ 0.41
ECHDC2-223ENST00000542552 H3BRB1 525 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 NOP56O00567 594 aaKnown RBP17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 ARP10275 920 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 CSF2RAP15509 400 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 CHMP4BP1P59074 171 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 PPIGQ13427 754 aaKnown RBP eCLIP17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 ME3Q16798 604 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 C7orf31Q8N865 590 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 AIFM3Q96NN9 605 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 KIF2CQ99661 725 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 ALG1Q9BT22 464 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 WNT8AQ9H1J5 351 aa17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 TUT1Q9H6E5 874 aaKnown RBP17.63■□□□□ 0.41
ECHDC2-223ENST00000542552 IGLV3-22A0A075B6J6 115 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 GSTTP1A0A1W2PQM5 241 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 FAM86B1E9PN63 330 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 PITPNM1O00562 1244 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 LARGE1O95461 756 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 FAM86B2P0C5J1 330 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 HOXC8P31273 242 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 HIC1Q14526 733 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 NPY5RQ15761 445 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 PTGISQ16647 500 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 RASGRP4Q8TDF6 673 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 GTF3C6Q969F1 213 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 VWCEQ96DN2 955 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 LRCH3Q96II8 777 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 AGO4Q9HCK5 861 aaKnown RBP17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 NFASCO94856 1347 aa17.62■□□□□ 0.41
ECHDC2-223ENST00000542552 TRIP12Q14669 1992 aaPredicted RBP17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 M0R2N6 131 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 EDIL3O43854 480 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 CIITAP33076 1130 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 RBM25P49756 843 aaKnown RBP17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 CCL23P55773 120 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 NLRP5P59047 1200 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 ITGB3BPQ13352 177 aaPredicted RBP17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 TMEM240Q5SV17 173 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 GPR153Q6NV75 609 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 NECAB1Q8N987 351 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 DAGLBQ8NCG7 672 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 IL23AQ9NPF7 189 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 PCDHA4Q9UN74 947 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 TANC1Q9C0D5 1861 aa17.61■□□□□ 0.41
ECHDC2-223ENST00000542552 TCF7P36402 384 aaPredicted RBP17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 ZNF76P36508 570 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 SP4Q02446 784 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 RBL2Q08999 1139 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 RASIP1Q5U651 963 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 GALNT17Q6IS24 598 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 TRIM50Q86XT4 487 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 SEPT1Q8WYJ6 367 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 DHX38Q92620 1227 aaKnown RBP17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 C22orf23Q9BZE7 217 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 JPH1Q9HDC5 661 aaPredicted RBP17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 PKD2L1Q9P0L9 805 aa17.6■□□□□ 0.41
ECHDC2-223ENST00000542552 FDPSP14324 419 aaKnown RBP17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 BFSP2Q13515 415 aa17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 PLA2G4DQ86XP0 818 aa17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 BLIDQ8IZY5 108 aa17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 CAGE1Q8TC20 777 aa17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 SCLYQ96I15 445 aa17.59■□□□□ 0.41
ECHDC2-223ENST00000542552 PHF20Q9BVI0 1012 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms