RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 ALG1Q9BT22 464 aa13.18□□□□□ -0.3
C2CD3-217ENST00000542452 MLXIPQ9HAP2 919 aa13.18□□□□□ -0.3
C2CD3-217ENST00000542452 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
C2CD3-217ENST00000542452 SIP14410 1827 aa13.18□□□□□ -0.3
C2CD3-217ENST00000542452 STK36Q9NRP7 1315 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 GBF1Q92538 1859 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 FAM86B1E9PN63 330 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 DEXIO95424 95 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 FOSP01100 380 aaPredicted RBP13.17□□□□□ -0.3
C2CD3-217ENST00000542452 FAM86B2P0C5J1 330 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 ARP10275 920 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 CHMP4BP1P59074 171 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 ARHGAP4P98171 946 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 AKAP17AQ02040 695 aaKnown RBP13.17□□□□□ -0.3
C2CD3-217ENST00000542452 SP4Q02446 784 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 FPGSQ05932 587 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 SSRP1Q08945 709 aaKnown RBP13.17□□□□□ -0.3
C2CD3-217ENST00000542452 ITGB3BPQ13352 177 aaPredicted RBP13.17□□□□□ -0.3
C2CD3-217ENST00000542452 MTMR1Q13613 665 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 NEDD9Q14511 834 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 SHHQ15465 462 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 MFSD5Q6N075 450 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 C16orf59Q7L2K0 433 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 SESTD1Q86VW0 696 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 TEX2Q8IWB9 1127 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
C2CD3-217ENST00000542452 NECAB1Q8N987 351 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 CCDC148Q8NFR7 591 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 DHX38Q92620 1227 aaKnown RBP13.17□□□□□ -0.3
C2CD3-217ENST00000542452 GTF3C6Q969F1 213 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 SENP7Q9BQF6 1050 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 SEZ6LQ9BYH1 1024 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
C2CD3-217ENST00000542452 C6orf50Q9HD87 102 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
C2CD3-217ENST00000542452 IGLV3-22A0A075B6J6 115 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 M0R2N6 131 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 CPLX1O14810 134 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
C2CD3-217ENST00000542452 CSF2RAP15509 400 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 NEK4P51957 841 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 ZNF200P98182 395 aaPredicted RBP13.16□□□□□ -0.3
C2CD3-217ENST00000542452 PTPN11Q06124 597 aaPredicted RBP13.16□□□□□ -0.3
C2CD3-217ENST00000542452 KIAA0753Q2KHM9 967 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 TRIM22Q8IYM9 498 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
C2CD3-217ENST00000542452 WNT8BQ93098 351 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 HIPK3Q9H422 1215 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 EHMT1Q9H9B1 1298 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 SH3GLB2Q9NR46 395 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 KCNH7Q9NS40 1196 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 GJB4Q9NTQ9 266 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 GTF2IRD1Q9UHL9 959 aa13.16□□□□□ -0.3
C2CD3-217ENST00000542452 GSTTP1A0A1W2PQM5 241 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 MEIS1O00470 390 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 PPFIA4O75335 1185 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 SLC34A2O95436 690 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 CYP3A4P08684 503 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 HOXC8P31273 242 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 CCL23P55773 120 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 LRIT3Q3SXY7 679 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 CEP55Q53EZ4 464 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 DAGLBQ8NCG7 672 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 NSUN7Q8NE18 718 aaKnown RBP13.15□□□□□ -0.3
C2CD3-217ENST00000542452 LENG9Q96B70 501 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 SCLYQ96I15 445 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
C2CD3-217ENST00000542452 KATNAL1Q9BW62 490 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 AGO4Q9HCK5 861 aaKnown RBP13.15□□□□□ -0.3
C2CD3-217ENST00000542452 KCNJ14Q9UNX9 436 aa13.15□□□□□ -0.3
C2CD3-217ENST00000542452 NOP56O00567 594 aaKnown RBP13.14□□□□□ -0.31
C2CD3-217ENST00000542452 JAK2O60674 1132 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
C2CD3-217ENST00000542452 ACRP10323 421 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 GNA11P29992 359 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 TCF7P36402 384 aaPredicted RBP13.14□□□□□ -0.31
C2CD3-217ENST00000542452 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
C2CD3-217ENST00000542452 PTGISQ16647 500 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 TRIM71Q2Q1W2 868 aaKnown RBP13.14□□□□□ -0.31
C2CD3-217ENST00000542452 TMEM240Q5SV17 173 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
C2CD3-217ENST00000542452 CDHR1Q96JP9 859 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 UIMC1Q96RL1 719 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 PCYT2Q99447 389 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 C22orf23Q9BZE7 217 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 PCDHA4Q9UN74 947 aa13.14□□□□□ -0.31
C2CD3-217ENST00000542452 NFASCO94856 1347 aa13.13□□□□□ -0.31
C2CD3-217ENST00000542452 CCNE2O96020 404 aa13.13□□□□□ -0.31
C2CD3-217ENST00000542452 NLRP5P59047 1200 aa13.13□□□□□ -0.31
C2CD3-217ENST00000542452 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.31
C2CD3-217ENST00000542452 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
C2CD3-217ENST00000542452 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
C2CD3-217ENST00000542452 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
C2CD3-217ENST00000542452 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
C2CD3-217ENST00000542452 BLIDQ8IZY5 108 aa13.13□□□□□ -0.31
C2CD3-217ENST00000542452 PHF20Q9BVI0 1012 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms