RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 MAP3K14Q99558 947 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 OSBPL7Q9BZF2 842 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 VCANP13611 3396 aa16.15■□□□□ 0.18
SUDS3-203ENST00000541591 RALGAPA2Q2PPJ7 1873 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 SPTBN5Q9NRC6 3674 aaKnown RBP16.14■□□□□ 0.17
SUDS3-203ENST00000541591 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 PFKMP08237 780 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 CTSHP09668 335 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 SMIM10L2AP0DMW4 78 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 SMIM10L2BP0DMW5 78 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 HOXD8P13378 290 aaPredicted RBP16.14■□□□□ 0.17
SUDS3-203ENST00000541591 RFC2P35250 354 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 GNAQP50148 359 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 MBTPS1Q14703 1052 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 TRIM71Q2Q1W2 868 aaKnown RBP16.14■□□□□ 0.17
SUDS3-203ENST00000541591 GNPTABQ3T906 1256 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 KRT40Q6A162 431 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 WWC2Q6AWC2 1192 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 TYW1BQ6NUM6 668 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 FAM117BQ6P1L5 589 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 APOA5Q6Q788 366 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 SAMD3Q8N6K7 520 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 AFAP1L1Q8TED9 768 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 INPP4AQ96PE3 977 aaPredicted RBP16.14■□□□□ 0.17
SUDS3-203ENST00000541591 LZTS2Q9BRK4 669 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 PCDHA11Q9Y5I1 949 aa16.14■□□□□ 0.17
SUDS3-203ENST00000541591 KLF18A0A0U1RQI7 1052 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 LCHNA4D1U4 455 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 SPATA31C2B4DYI2 1134 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 H3BRB1 525 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 TREHO43280 583 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 FIBPO43427 364 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 ATP9AO75110 1047 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 CALM1P0DP23 149 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 CALM2P0DP24 149 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 CALM3P0DP25 149 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 THPOP40225 353 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 WDR5P61964 334 aaKnown RBP16.13■□□□□ 0.17
SUDS3-203ENST00000541591 RNF20Q5VTR2 975 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 PCNX4Q63HM2 1172 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 TRAF7Q6Q0C0 670 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 UIMC1Q96RL1 719 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 GPR20Q99678 358 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 MTA3Q9BTC8 594 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 TUT1Q9H6E5 874 aaKnown RBP16.13■□□□□ 0.17
SUDS3-203ENST00000541591 PSTPIP2Q9H939 334 aa16.13■□□□□ 0.17
SUDS3-203ENST00000541591 C17orf102A2RUQ5 167 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 GOLGA8AA7E2F4 631 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 GOLGA8BA8MQT2 603 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 PIK3CDO00329 1044 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 ZBTB43O43298 467 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 PPFIA4O75335 1185 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 MARK3P27448 753 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 CDC27P30260 824 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 ICAM3P32942 547 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 KCNJ6P48051 423 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 EXOSC10Q01780 885 aaKnown RBP16.12■□□□□ 0.17
SUDS3-203ENST00000541591 APOBRQ0VD83 1088 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 PTK7Q13308 1070 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 RTN1Q16799 776 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 SYNE3Q6ZMZ3 975 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 HERC6Q8IVU3 1022 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 TMTC2Q8N394 836 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 ATP6V0A1Q93050 837 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 SLC9A7Q96T83 725 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 SETD4Q9NVD3 440 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 TMEM260Q9NX78 707 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 PCDHA6Q9UN73 950 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 PCDHA8Q9Y5H6 950 aa16.12■□□□□ 0.17
SUDS3-203ENST00000541591 ADAMTS3O15072 1205 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 TGFB3P10600 412 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 ITGB5P18084 799 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 SMARCA1P28370 1054 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 NAPAP54920 295 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 NEDD9Q14511 834 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 METTL7BQ6UX53 244 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
SUDS3-203ENST00000541591 ARNTL2Q8WYA1 636 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 ZBTB10Q96DT7 871 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 JAKMIP1Q96N16 626 aaKnown RBP16.11■□□□□ 0.17
SUDS3-203ENST00000541591 RNPEPQ9H4A4 650 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 MTUS1Q9ULD2 1270 aa16.11■□□□□ 0.17
SUDS3-203ENST00000541591 SPDYE3A6NKU9 549 aa16.1■□□□□ 0.17
SUDS3-203ENST00000541591 KCNA2P16389 499 aa16.1■□□□□ 0.17
SUDS3-203ENST00000541591 ARHGAP4P98171 946 aa16.1■□□□□ 0.17
SUDS3-203ENST00000541591 CNKSR3Q6P9H4 555 aa16.1■□□□□ 0.17
SUDS3-203ENST00000541591 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.1■□□□□ 0.17
SUDS3-203ENST00000541591 Q6ZUG5 572 aa16.1■□□□□ 0.17
SUDS3-203ENST00000541591 NLRX1Q86UT6 975 aa16.1■□□□□ 0.17
SUDS3-203ENST00000541591 FAM217BQ9NTX9 383 aaPredicted RBP16.1■□□□□ 0.17
SUDS3-203ENST00000541591 TLL1O43897 1013 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 STAM2O75886 525 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 TCF7P36402 384 aaPredicted RBP16.09■□□□□ 0.17
SUDS3-203ENST00000541591 FGD1P98174 961 aa16.09■□□□□ 0.17
SUDS3-203ENST00000541591 TAP1Q03518 808 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms