RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 NEK9Q8TD19 979 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 WNT8BQ93098 351 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 TOP1MTQ969P6 601 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 PABPC5Q96DU9 382 aaKnown RBP14.22□□□□□ -0.13
SNHG1-216ENST00000541416 DSCC1Q9BVC3 393 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 USP26Q9BXU7 913 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 UPF3BQ9BZI7 483 aaKnown RBP14.22□□□□□ -0.13
SNHG1-216ENST00000541416 LNPKQ9C0E8 428 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 NSUN3Q9H649 340 aaKnown RBP14.22□□□□□ -0.13
SNHG1-216ENST00000541416 CD320Q9NPF0 282 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 ZNF215Q9UL58 517 aaPredicted RBP14.22□□□□□ -0.13
SNHG1-216ENST00000541416 DCXO43602 365 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 SORBS3O60504 671 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 UPP2O95045 317 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 SMIM10L2AP0DMW4 78 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 SMIM10L2BP0DMW5 78 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 TRDNQ13061 729 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 AAMPQ13685 434 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 NEDD9Q14511 834 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 TMEM192Q8IY95 271 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 C16orf70Q9BSU1 422 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 IFIH1Q9BYX4 1025 aaKnown RBP14.21□□□□□ -0.13
SNHG1-216ENST00000541416 KCNH6Q9H252 994 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 RWDD3Q9Y3V2 267 aa14.21□□□□□ -0.13
SNHG1-216ENST00000541416 RGS20O76081 388 aa14.2□□□□□ -0.14
SNHG1-216ENST00000541416 LGALS2P05162 132 aa14.2□□□□□ -0.14
SNHG1-216ENST00000541416 HOXA13P31271 388 aaPredicted RBP14.2□□□□□ -0.14
SNHG1-216ENST00000541416 RRP1P56182 461 aaKnown RBP14.2□□□□□ -0.14
SNHG1-216ENST00000541416 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
SNHG1-216ENST00000541416 FCHSD1Q86WN1 690 aa14.2□□□□□ -0.14
SNHG1-216ENST00000541416 POP1Q99575 1024 aaKnown RBP14.2□□□□□ -0.14
SNHG1-216ENST00000541416 COL4A6Q14031 1691 aa14.2□□□□□ -0.14
SNHG1-216ENST00000541416 ERICH2A1L162 156 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 H3BQ06 376 aaPredicted RBP14.19□□□□□ -0.14
SNHG1-216ENST00000541416 OPLAHO14841 1288 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 TREHO43280 583 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 RB1P06400 928 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 CTSHP09668 335 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 HOXC8P31273 242 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 TCEAL5Q5H9L2 206 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 METTL7BQ6UX53 244 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 HOMER1Q86YM7 354 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 STAG2Q8N3U4 1231 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 FIBCD1Q8N539 461 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 MTMR8Q96EF0 704 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 IL17RAQ96F46 866 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 C11orf84Q9BUA3 381 aaPredicted RBP14.19□□□□□ -0.14
SNHG1-216ENST00000541416 LMAN2LQ9H0V9 348 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 RNPEPQ9H4A4 650 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 CLDND1Q9NY35 253 aa14.19□□□□□ -0.14
SNHG1-216ENST00000541416 RALGAPA2Q2PPJ7 1873 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 FIBPO43427 364 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 CTNNB1P35222 781 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 SP2Q02086 613 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 HIC1Q14526 733 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 SART3Q15020 963 aaKnown RBP14.18□□□□□ -0.14
SNHG1-216ENST00000541416 RSPH3Q86UC2 560 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 ADHFE1Q8IWW8 467 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 GIMAP8Q8ND71 665 aaPredicted RBP14.18□□□□□ -0.14
SNHG1-216ENST00000541416 PPP2R3CQ969Q6 453 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 RWDD1Q9H446 243 aaPredicted RBP14.18□□□□□ -0.14
SNHG1-216ENST00000541416 OSBPL3Q9H4L5 887 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 MAD2L2Q9UI95 211 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 WDFY4Q6ZS81 3184 aa14.18□□□□□ -0.14
SNHG1-216ENST00000541416 NLRC5Q86WI3 1866 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 PNMA6FA0A0J9YX94 578 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 PALM3A6NDB9 673 aaPredicted RBP14.17□□□□□ -0.14
SNHG1-216ENST00000541416 ICAM3P32942 547 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 ZP2Q05996 745 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 TAF2Q6P1X5 1199 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 ALYREFQ86V81 257 aaKnown RBP14.17□□□□□ -0.14
SNHG1-216ENST00000541416 IL31RAQ8NI17 732 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 CUL5Q93034 780 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 SETD4Q9NVD3 440 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 MUC6Q6W4X9 2439 aa14.17□□□□□ -0.14
SNHG1-216ENST00000541416 NRCAMQ92823 1304 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 C5orf42Q9H799 3197 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 C5orf67F2Z3F1 127 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 PPP1R11O60927 126 aaPredicted RBP14.16□□□□□ -0.14
SNHG1-216ENST00000541416 RPLP2P05387 115 aaKnown RBP14.16□□□□□ -0.14
SNHG1-216ENST00000541416 ARHGAP4P98171 946 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 COL19A1Q14993 1142 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 SEC23AQ15436 765 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 B4GALNT3Q6L9W6 998 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 XRRA1Q6P2D8 792 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 CYFIP1Q7L576 1253 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 CHD1LQ86WJ1 897 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 MFSD14AQ96MC6 490 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
SNHG1-216ENST00000541416 PIGSQ96S52 555 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 GPR20Q99678 358 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 RIOX1Q9H6W3 641 aa14.16□□□□□ -0.14
SNHG1-216ENST00000541416 ADGRA3Q8IWK6 1321 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 KAT6AQ92794 2004 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 PIEZO1Q92508 2521 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 TRIOO75962 3097 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.15□□□□□ -0.14
SNHG1-216ENST00000541416 POTEB3A0JP26 581 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 SPATA31C2B4DYI2 1134 aa14.15□□□□□ -0.14
SNHG1-216ENST00000541416 BMPR1AP36894 532 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms