RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 FOSL2P15408 326 aa19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 RFC2P35250 354 aa19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 SEMA3FQ13275 785 aa19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 PFKFB3Q16875 520 aaPredicted RBP19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 GDF6Q6KF10 455 aaPredicted RBP19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 DEFB128Q7Z7B8 93 aa19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 CAGE1Q8TC20 777 aa19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 CCDC12Q8WUD4 166 aaPredicted RBP19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 HERVK_113Q902F9 699 aa19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 TM6SF1Q9BZW5 370 aa19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 CXXC1Q9P0U4 656 aaPredicted RBP19.64■□□□□ 0.73
CACNA2D4-211ENST00000540728 NID2Q14112 1375 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 H3BRB1 525 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 MAFGO15525 162 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 EIF5BO60841 1220 aaKnown RBP19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 SCG2P13521 617 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 PBX2P40425 430 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 RASIP1Q5U651 963 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 TYW1BQ6NUM6 668 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 PBX4Q9BYU1 374 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 TUT1Q9H6E5 874 aaKnown RBP19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 UBIAD1Q9Y5Z9 338 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 SCN5AQ14524 2016 aa19.63■□□□□ 0.73
CACNA2D4-211ENST00000540728 CDH23Q9H251 3354 aa19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 PRPF3O43395 683 aaKnown RBP19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 LGALS2P05162 132 aa19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 IQCF3P0C7M6 154 aa19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 AP3B2Q13367 1082 aa19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 MTMR1Q13613 665 aa19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 MAFAQ8NHW3 353 aaPredicted RBP19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 GPR20Q99678 358 aa19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 C16orf70Q9BSU1 422 aa19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 BCAS3Q9H6U6 928 aa19.62■□□□□ 0.73
CACNA2D4-211ENST00000540728 GBF1Q92538 1859 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 ACTN1P12814 892 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 ITGB5P18084 799 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 PDIA3P30101 505 aaKnown RBP19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 EVCP57679 992 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 SP4Q02446 784 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 RAB30Q15771 203 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 MCTP2Q6DN12 878 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 AFAP1L1Q8TED9 768 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 ANO3Q9BYT9 981 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 ZNF576Q9H609 170 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 C6orf50Q9HD87 102 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 JADE2Q9NQC1 790 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 MSRAQ9UJ68 235 aa19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 ZNF215Q9UL58 517 aaPredicted RBP19.61■□□□□ 0.73
CACNA2D4-211ENST00000540728 DOCK5Q9H7D0 1870 aa19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 CCT2P78371 535 aaKnown RBP19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 PTK7Q13308 1070 aa19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 UTP14CQ5TAP6 766 aaKnown RBP19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 PHKBQ93100 1093 aa19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 RNF26Q9BY78 433 aaPredicted RBP19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 UPF3BQ9BZI7 483 aaKnown RBP19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 FTOQ9C0B1 505 aaKnown RBP eCLIP19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 SLC4A7Q9Y6M7 1214 aa19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 TRIP12Q14669 1992 aaPredicted RBP19.6■□□□□ 0.73
CACNA2D4-211ENST00000540728 ESYT2A0FGR8 921 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 C17orf102A2RUQ5 167 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 CPLX1O14810 134 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 ATP9AO75110 1047 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 PARNO95453 639 aaKnown RBP19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 GNAT1P11488 350 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 SELPP16109 830 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 KCNA2P16389 499 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 IFNAR1P17181 557 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 GNA11P29992 359 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 ZNF76P36508 570 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 TOB2Q14106 344 aaPredicted RBP19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 GRIN2CQ14957 1233 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 TRIM22Q8IYM9 498 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 PGBD1Q96JS3 809 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 MXRA8Q9BRK3 442 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 SLC26A6Q9BXS9 759 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 PDRG1Q9NUG6 133 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 PKD2L1Q9P0L9 805 aa19.59■□□□□ 0.73
CACNA2D4-211ENST00000540728 SMIM10L2AP0DMW4 78 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 SMIM10L2BP0DMW5 78 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 CLK2P49760 499 aaKnown RBP19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 RBL2Q08999 1139 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 NTRK3Q16288 839 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 PKN1Q16512 942 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 CEP55Q53EZ4 464 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 JAKMIP3Q5VZ66 844 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 CPLX2Q6PUV4 134 aaKnown RBP19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 LRRC8DQ7L1W4 858 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 CCDC148Q8NFR7 591 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 BICD2Q8TD16 824 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 SEPT1Q8WYJ6 367 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 ZNF274Q96GC6 653 aaPredicted RBP19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 CTAGE1Q96RT6 745 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 ZMYND12Q9H0C1 365 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 NKX2-4Q9H2Z4 354 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 NCOA5Q9HCD5 579 aaKnown RBP19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 TMEM260Q9NX78 707 aa19.58■□□□□ 0.72
CACNA2D4-211ENST00000540728 ATP2A2P16615 1042 aaKnown RBP19.57■□□□□ 0.72
CACNA2D4-211ENST00000540728 TCF7P36402 384 aaPredicted RBP19.57■□□□□ 0.72
CACNA2D4-211ENST00000540728 SREBF1P36956 1147 aa19.57■□□□□ 0.72
CACNA2D4-211ENST00000540728 RABGGTBP53611 331 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms