RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RNPEPQ9H4A4 650 aa14.45□□□□□ -0.1
COPS7A-211ENST00000540408 ZNF215Q9UL58 517 aaPredicted RBP14.45□□□□□ -0.1
COPS7A-211ENST00000540408 REV3LO60673 3130 aa14.45□□□□□ -0.1
COPS7A-211ENST00000540408 PNMA6FA0A0J9YX94 578 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 IFIT3O14879 490 aaKnown RBP14.44□□□□□ -0.1
COPS7A-211ENST00000540408 PPP1R11O60927 126 aaPredicted RBP14.44□□□□□ -0.1
COPS7A-211ENST00000540408 UPP2O95045 317 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 LGALS2P05162 132 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 SMIM10L2AP0DMW4 78 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 SMIM10L2BP0DMW5 78 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 HIC1Q14526 733 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 EPC2Q52LR7 807 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 TIGD5Q53EQ6 642 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 PTCRAQ6ISU1 281 aaPredicted RBP14.44□□□□□ -0.1
COPS7A-211ENST00000540408 FAM178BQ8IXR5 827 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
COPS7A-211ENST00000540408 APBB2Q92870 758 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 TOP1MTQ969P6 601 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 ZFP91Q96JP5 570 aaPredicted RBP14.44□□□□□ -0.1
COPS7A-211ENST00000540408 RIOX1Q9H6W3 641 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 FAM50BQ9Y247 325 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
COPS7A-211ENST00000540408 PTPRSQ13332 1948 aa14.44□□□□□ -0.1
COPS7A-211ENST00000540408 LAMA4Q16363 1823 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 COL4A4P53420 1690 aaPredicted RBP14.43□□□□□ -0.1
COPS7A-211ENST00000540408 H3BNC9 293 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 TREHO43280 583 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 FIBPO43427 364 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 CTSHP09668 335 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 ALADP13716 330 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 GPM6BQ13491 265 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 GRM4Q14833 912 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 METTL7BQ6UX53 244 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 CYB5R4Q7L1T6 521 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 CYFIP1Q7L576 1253 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 RALYLQ86SE5 291 aaKnown RBP14.43□□□□□ -0.1
COPS7A-211ENST00000540408 BANK1Q8NDB2 785 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 IL31RAQ8NI17 732 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.43□□□□□ -0.1
COPS7A-211ENST00000540408 RUFY2Q8WXA3 655 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 CUL5Q93034 780 aa14.43□□□□□ -0.1
COPS7A-211ENST00000540408 SPATA31C2B4DYI2 1134 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 IGHDP01880 384 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 HOXC8P31273 242 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
COPS7A-211ENST00000540408 ICAM3P32942 547 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 WTAPQ15007 396 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 EP400NLQ6ZTU2 488 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 CATIPQ7Z7H3 387 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 TMEM192Q8IY95 271 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 GIMAP8Q8ND71 665 aaPredicted RBP14.42□□□□□ -0.1
COPS7A-211ENST00000540408 GPKOWQ92917 476 aaPredicted RBP eCLIP14.42□□□□□ -0.1
COPS7A-211ENST00000540408 IFIH1Q9BYX4 1025 aaKnown RBP14.42□□□□□ -0.1
COPS7A-211ENST00000540408 SETD4Q9NVD3 440 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 RTEL1Q9NZ71 1219 aa14.42□□□□□ -0.1
COPS7A-211ENST00000540408 SIP14410 1827 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 FAM86C2PA6NEL3 165 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 GRXCR2A6NFK2 248 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 NCK2O43639 380 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 ARHGAP4P98171 946 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
COPS7A-211ENST00000540408 CSPP1Q1MSJ5 1256 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 NLRX1Q86UT6 975 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 FIBCD1Q8N539 461 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 NCOA7Q8NI08 942 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 SMARCC2Q8TAQ2 1214 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 KHSRPQ92945 711 aaKnown RBP eCLIP14.41□□□□□ -0.1
COPS7A-211ENST00000540408 IL17RAQ96F46 866 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 INPP4AQ96PE3 977 aaPredicted RBP14.41□□□□□ -0.1
COPS7A-211ENST00000540408 CD320Q9NPF0 282 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 NRCAMQ92823 1304 aa14.41□□□□□ -0.1
COPS7A-211ENST00000540408 PRR33A8MZF0 331 aa14.4□□□□□ -0.1
COPS7A-211ENST00000540408 IL9P15248 144 aa14.4□□□□□ -0.1
COPS7A-211ENST00000540408 MRPS9P82933 396 aaKnown RBP14.4□□□□□ -0.1
COPS7A-211ENST00000540408 UTP14CQ5TAP6 766 aaKnown RBP14.4□□□□□ -0.1
COPS7A-211ENST00000540408 XRRA1Q6P2D8 792 aa14.4□□□□□ -0.1
COPS7A-211ENST00000540408 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
COPS7A-211ENST00000540408 NEK9Q8TD19 979 aa14.4□□□□□ -0.1
COPS7A-211ENST00000540408 PABPC5Q96DU9 382 aaKnown RBP14.4□□□□□ -0.1
COPS7A-211ENST00000540408 GPR20Q99678 358 aa14.4□□□□□ -0.1
COPS7A-211ENST00000540408 SENP7Q9BQF6 1050 aa14.4□□□□□ -0.1
COPS7A-211ENST00000540408 NSUN3Q9H649 340 aaKnown RBP14.4□□□□□ -0.1
COPS7A-211ENST00000540408 RWDD3Q9Y3V2 267 aa14.4□□□□□ -0.1
COPS7A-211ENST00000540408 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.39□□□□□ -0.11
COPS7A-211ENST00000540408 H3BQ06 376 aaPredicted RBP14.39□□□□□ -0.11
COPS7A-211ENST00000540408 CYTH3O43739 400 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 RB1P06400 928 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 SP4Q02446 784 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 TROAPQ12815 778 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 FAM26DQ5JW98 314 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 PCNX4Q63HM2 1172 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 TAF2Q6P1X5 1199 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 CTCFLQ8NI51 663 aaPredicted RBP14.39□□□□□ -0.11
COPS7A-211ENST00000540408 PIBF1Q8WXW3 757 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 RRP36Q96EU6 259 aaKnown RBP14.39□□□□□ -0.11
COPS7A-211ENST00000540408 CDHR1Q96JP9 859 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 UIMC1Q96RL1 719 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 BCAS3Q9H6U6 928 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 C11orf16Q9NQ32 467 aa14.39□□□□□ -0.11
COPS7A-211ENST00000540408 SEC63Q9UGP8 760 aaKnown RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms