RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CDHR1Q96JP9 859 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 CSRNP2Q9H175 543 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 PDGFCQ9NRA1 345 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 PCDHA12Q9UN75 941 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 LRRC37A2A6NM11 1700 aa21.36■■□□□ 1.01
TNFRSF1A-213ENST00000540022 DHX15O43143 795 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 FXR2P51116 673 aaKnown RBP eCLIP21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SP2Q02086 613 aa21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 MTFR1Q15390 333 aa21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ADALQ6DHV7 355 aa21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TAPT1Q6NXT6 567 aa21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TMEM106CQ9BVX2 250 aa21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ABHD16BQ9H3Z7 469 aa21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 VTA1Q9NP79 307 aa21.35■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ARIH2O95376 493 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 KCNA2P16389 499 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SPECC1Q5M775 1068 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 LRCH2Q5VUJ6 765 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SLAIN1Q8ND83 568 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 RIT2Q99578 217 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 GAS7O60861 476 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SPIRE1Q08AE8 756 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ACVR2BQ13705 512 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 NFKBIBQ15653 356 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TMEM266Q2M3C6 531 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 PRAMEF19Q5SWL8 479 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 SHC4Q6S5L8 630 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 IGSF22Q8N9C0 903 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 ZNF579Q8NAF0 562 aaKnown RBP21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 BCAS3Q9H6U6 928 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 VAV3Q9UKW4 847 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 TCHHQ07283 1943 aa21.34■■□□□ 1.01
TNFRSF1A-213ENST00000540022 PLXNA1Q9UIW2 1896 aa21.33■■□□□ 1.01
TNFRSF1A-213ENST00000540022 GOLGA6L4A6NEF3 574 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 POTEMA6NI47 508 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 DDX11L8A8MPP1 907 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 DDX39AO00148 427 aaKnown RBP21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 UBA1P22314 1058 aaKnown RBP21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 LONP1P36776 959 aaKnown RBP21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 TMEM63BQ5T3F8 832 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 CCDC62Q6P9F0 684 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 USP49Q70CQ1 688 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 PXYLP1Q8TE99 480 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 SCFD2Q8WU76 684 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 TEKT3Q9BXF9 490 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 TBC1D22BQ9NU19 505 aa21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 DDX41Q9UJV9 622 aaKnown RBP21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 ZHX1Q9UKY1 873 aaPredicted RBP21.33■■□□□ 1
TNFRSF1A-213ENST00000540022 RBM47A0AV96 593 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 PP2D1A8MPX8 630 aa21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 TGFB3P10600 412 aa21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 CDC25AP30304 524 aa21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 UBE2HP62256 183 aa21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 LY6KQ17RY6 165 aa21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 KCNV1Q6PIU1 500 aa21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 B3GNT9Q6UX72 402 aa21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 SENP7Q9BQF6 1050 aa21.32■■□□□ 1
TNFRSF1A-213ENST00000540022 NFASCO94856 1347 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 A0A1W2PQ27 194 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 A0A1W2PQ64 194 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 A0A1W2PQD8 194 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 ZNF865P0CJ78 1059 aaPredicted RBP21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 ADCYAP1R1P41586 468 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 PDIA5Q14554 519 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 RESP18Q5W5W9 173 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 TRPV1Q8NER1 839 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 EPSTI1Q96J88 318 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 UNC45AQ9H3U1 944 aa21.31■■□□□ 1
TNFRSF1A-213ENST00000540022 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 SORBS3O60504 671 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 INHAP05111 366 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 TXNP10599 105 aaKnown RBP21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 CMA1P23946 247 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 CACNB2Q08289 660 aaPredicted RBP21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 PPP2R5CQ13362 524 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 TTLL4Q14679 1199 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 MFSD14CQ5VZR4 134 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 TRMT44Q8IYL2 757 aaKnown RBP21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 SYMPKQ92797 1274 aaKnown RBP21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 AK8Q96MA6 479 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 SDF4Q9BRK5 362 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 RAB34Q9BZG1 259 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 LRWD1Q9UFC0 647 aa21.3■■□□□ 1
TNFRSF1A-213ENST00000540022 EML1O00423 815 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 CHMP2AO43633 222 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 HMGCRP04035 888 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 CCDC144BQ3MJ40 725 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 NCAPH2Q6IBW4 605 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 CYFIP1Q7L576 1253 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 FSIP1Q8NA03 581 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 COPS5Q92905 334 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 GOLPH3LQ9H4A5 285 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 A0A1B0GVL5 298 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 GGPS1O95749 300 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 CCNE2O96020 404 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 CCL5P13501 91 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 PRKAR2AP13861 404 aaKnown RBP21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 PTGS1P23219 599 aa21.29■■□□□ 1
TNFRSF1A-213ENST00000540022 NEDD9Q14511 834 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms