RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 TEX2Q8IWB9 1127 aa7.43□□□□□ -1.22
SNHG1-212ENST00000539975 MSL3Q8N5Y2 521 aaKnown RBP7.43□□□□□ -1.22
SNHG1-212ENST00000539975 MCOLN1Q9GZU1 580 aa7.43□□□□□ -1.22
SNHG1-212ENST00000539975 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
SNHG1-212ENST00000539975 PSTPIP2Q9H939 334 aa7.43□□□□□ -1.22
SNHG1-212ENST00000539975 NCOA5Q9HCD5 579 aaKnown RBP7.43□□□□□ -1.22
SNHG1-212ENST00000539975 BRMS1Q9HCU9 246 aa7.43□□□□□ -1.22
SNHG1-212ENST00000539975 C6orf50Q9HD87 102 aa7.43□□□□□ -1.22
SNHG1-212ENST00000539975 RIPK3Q9Y572 518 aa7.43□□□□□ -1.22
SNHG1-212ENST00000539975 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.43□□□□□ -1.22
SNHG1-212ENST00000539975 ZNF536O15090 1300 aa7.43□□□□□ -1.22
SNHG1-212ENST00000539975 LOC285556D6RIA3 1793 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 SMCO2A6NFE2 343 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 CYTH3O43739 400 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 HMGCRP04035 888 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 PGK2P07205 417 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 CNGA1P29973 690 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 CDC27P30260 824 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 SOX11P35716 441 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 ABL2P42684 1182 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 ADCY7P51828 1080 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 NLRP5P59047 1200 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 HMGN5P82970 282 aaKnown RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 GNL2Q13823 731 aaKnown RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 BAATQ14032 418 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 SAFBQ15424 915 aaKnown RBP eCLIP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 PFKFB3Q16875 520 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 ARHGEF16Q5VV41 709 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 HSCBQ8IWL3 235 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 FAM177A1Q8N128 213 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 MEIOBQ8N635 442 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 DNERQ8NFT8 737 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 NSUN6Q8TEA1 469 aaKnown RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 PHKBQ93100 1093 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 GTF3C6Q969F1 213 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 MTMR8Q96EF0 704 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 LLPHQ9BRT6 129 aaKnown RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 TSEN34Q9BSV6 310 aaKnown RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 SH3GLB2Q9NR46 395 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 CYP39A1Q9NYL5 469 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 GMPR2Q9P2T1 348 aaKnown RBP7.42□□□□□ -1.22
SNHG1-212ENST00000539975 GJD2Q9UKL4 321 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 GABRQQ9UN88 632 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 PTCH2Q9Y6C5 1203 aa7.42□□□□□ -1.22
SNHG1-212ENST00000539975 PHIPQ8WWQ0 1821 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 LOC102724159A0A0B4J2E5 919 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 hCG_1642624A0A1W2PR95 340 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 NFIBO00712 420 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 FOSP01100 380 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-212ENST00000539975 HOXC6P09630 235 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 ELNP15502 786 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 CAPN2P17655 700 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 RPS6P62753 249 aaKnown RBP7.41□□□□□ -1.22
SNHG1-212ENST00000539975 SCRN1Q12765 414 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 COL9A3Q14050 684 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-212ENST00000539975 BECN1Q14457 450 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 PWP2Q15269 919 aaKnown RBP7.41□□□□□ -1.22
SNHG1-212ENST00000539975 ME3Q16798 604 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 MUM1L1Q5H9M0 696 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 COL13A1Q5TAT6 717 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-212ENST00000539975 OLFML2BQ68BL8 750 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 GALNT17Q6IS24 598 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 Q6ZVU0 165 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 TRIM46Q7Z4K8 759 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 FCHSD1Q86WN1 690 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 CCDC83Q8IWF9 413 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 NECAB1Q8N987 351 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 MAML3Q96JK9 1138 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 RMDN3Q96TC7 470 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 TINF2Q9BSI4 451 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 A1CFQ9NQ94 594 aaKnown RBP7.41□□□□□ -1.22
SNHG1-212ENST00000539975 BARHL2Q9NY43 387 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 ORC3Q9UBD5 711 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-212ENST00000539975 NRBP1Q9UHY1 535 aa7.41□□□□□ -1.22
SNHG1-212ENST00000539975 GREB1LQ9C091 1923 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-212ENST00000539975 ERVH48-1M5A8F1 160 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 MSCO60682 206 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 COBLO75128 1261 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 MYCP01106 439 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-212ENST00000539975 INHAP05111 366 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 CTGFP29279 349 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 ZNF76P36508 570 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 STXBP2Q15833 593 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 ZNF792Q3KQV3 632 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 SH3TC2Q8TF17 1288 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 CLEC4DQ8WXI8 215 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 USP6NLQ92738 828 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 IWS1Q96ST2 819 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 KIF2CQ99661 725 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 ALG1Q9BT22 464 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 RNF208Q9H0X6 261 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 ABHD16BQ9H3Z7 469 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 SPC25Q9HBM1 224 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 RIC8AQ9NPQ8 531 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 SMC3Q9UQE7 1217 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 RPTORQ8N122 1335 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 CNTNAP5Q8WYK1 1306 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 SYNGAP1Q96PV0 1343 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 NID2Q14112 1375 aa7.4□□□□□ -1.22
SNHG1-212ENST00000539975 STK36Q9NRP7 1315 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms