RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 LOXHD1Q8IVV2 1947 aa17.05■□□□□ 0.32
CCDC144NL-202ENST00000539177 KMT2EQ8IZD2 1858 aa17.05■□□□□ 0.32
CCDC144NL-202ENST00000539177 BAZ2BQ9UIF8 2168 aaKnown RBP17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 OPLAHO14841 1288 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 KDM4AO75164 1064 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 SMIM10L2AP0DMW4 78 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 SMIM10L2BP0DMW5 78 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 HOXA13P31271 388 aaPredicted RBP17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 SP2Q02086 613 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 DLX2Q07687 328 aaPredicted RBP17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 COL19A1Q14993 1142 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 ASPRV1Q53RT3 343 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 KCNH6Q9H252 994 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 RNF41Q9H4P4 317 aaPredicted RBP17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 JMJD4Q9H9V9 463 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 MLXIPQ9HAP2 919 aa17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
CCDC144NL-202ENST00000539177 H3BRB1 525 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 GRM6O15303 877 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 MBTPS2O43462 519 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 LGALS2P05162 132 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 PARP1P09874 1014 aaKnown RBP17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 GTF2F1P35269 517 aaKnown RBP eCLIP17.03■□□□□ 0.326e-9■□□□□ 10.5
CCDC144NL-202ENST00000539177 HSD17B4P51659 736 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 PGM5Q15124 567 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 ANKRD45Q5TZF3 282 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 IQCA1Q86XH1 822 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 FIBCD1Q8N539 461 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 UPF3BQ9BZI7 483 aaKnown RBP17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 RNPEPQ9H4A4 650 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 IGFLR1Q9H665 355 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 TUT1Q9H6E5 874 aaKnown RBP17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 BCAS3Q9H6U6 928 aa17.03■□□□□ 0.32
CCDC144NL-202ENST00000539177 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.32
CCDC144NL-202ENST00000539177 B4E1Z4 1266 aa17.02■□□□□ 0.32
CCDC144NL-202ENST00000539177 HYAL1Q12794 435 aa17.02■□□□□ 0.32
CCDC144NL-202ENST00000539177 SMAD2Q15796 467 aaKnown RBP17.02■□□□□ 0.32
CCDC144NL-202ENST00000539177 IL17RAQ96F46 866 aa17.02■□□□□ 0.32
CCDC144NL-202ENST00000539177 MFSD14AQ96MC6 490 aa17.02■□□□□ 0.32
CCDC144NL-202ENST00000539177 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
CCDC144NL-202ENST00000539177 PLXNA4Q9HCM2 1894 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 ZNF213O14771 459 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 LINC01565O15544 149 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 PPP1R11O60927 126 aaPredicted RBP17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 TBX10O75333 385 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 PDE1AP54750 535 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 KCNV1Q6PIU1 500 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 TRIM50Q86XT4 487 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 RNF135Q8IUD6 432 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 STAG2Q8N3U4 1231 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 ENAHQ8N8S7 591 aaPredicted RBP17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 SNX27Q96L92 541 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 SETD4Q9NVD3 440 aa17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
CCDC144NL-202ENST00000539177 ADGRA3Q8IWK6 1321 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 NOP56O00567 594 aaKnown RBP17■□□□□ 0.31
CCDC144NL-202ENST00000539177 CCND2P30279 289 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 HOXC8P31273 242 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 CTC1Q2NKJ3 1217 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
CCDC144NL-202ENST00000539177 VSIG10LQ86VR7 867 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 FCHSD1Q86WN1 690 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 PRSS33Q8NF86 280 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 APBB2Q92870 758 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 RILPL2Q969X0 211 aa17■□□□□ 0.31
CCDC144NL-202ENST00000539177 POP1Q99575 1024 aaKnown RBP17■□□□□ 0.31
CCDC144NL-202ENST00000539177 C11orf84Q9BUA3 381 aaPredicted RBP17■□□□□ 0.31
CCDC144NL-202ENST00000539177 TTC3P53804 2025 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 C5orf67F2Z3F1 127 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 STXBP3O00186 592 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 NCK2O43639 380 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 CAND2O75155 1236 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 LINC00271P0C7V0 271 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 BMPR1AP36894 532 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 ARHGAP4P98171 946 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 CCDC178Q5BJE1 867 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 STOX1Q6ZVD7 989 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 HOMER1Q86YM7 354 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 TELO2Q9Y4R8 837 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 PCDHA1Q9Y5I3 950 aa16.99■□□□□ 0.31
CCDC144NL-202ENST00000539177 GHRP10912 638 aa16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 SP4Q02446 784 aa16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 GHRHRQ02643 423 aa16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 IER5LQ5T953 404 aa16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 UTP14CQ5TAP6 766 aaKnown RBP16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 LMAN2LQ9H0V9 348 aa16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 ALG13Q9NP73 1137 aaKnown RBP16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 CD207Q9UJ71 328 aa16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 TRIOO75962 3097 aa16.98■□□□□ 0.31
CCDC144NL-202ENST00000539177 RB1P06400 928 aa16.97■□□□□ 0.31
CCDC144NL-202ENST00000539177 TGFB3P10600 412 aa16.97■□□□□ 0.31
CCDC144NL-202ENST00000539177 GNAT1P11488 350 aa16.97■□□□□ 0.31
CCDC144NL-202ENST00000539177 NDUFV1P49821 464 aa16.97■□□□□ 0.31
CCDC144NL-202ENST00000539177 CYFIP1Q7L576 1253 aa16.97■□□□□ 0.31
CCDC144NL-202ENST00000539177 LMBR1Q8WVP7 490 aa16.97■□□□□ 0.31
CCDC144NL-202ENST00000539177 EDAQ92838 391 aa16.97■□□□□ 0.31
CCDC144NL-202ENST00000539177 ZSWIM5Q9P217 1185 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms