RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 ELF3P78545 371 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 NOVA2Q9UNW9 492 aaKnown RBP20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 TLR2O60603 784 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 ATP6V1G2O95670 118 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 STARD3NLO95772 234 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 GBP2P32456 591 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 LRRC63Q05C16 580 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 SLC18A3Q16572 532 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 SCFD2Q8WU76 684 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 ANKRD36CQ5JPF3 1778 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 UBAP1LF5GYI3 381 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 BACH1O14867 736 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 PPIP5K2O43314 1243 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 ATP2C2O75185 946 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 DRD4P21917 467 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 DAGLBQ8NCG7 672 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 UBLCP1Q8WVY7 318 aaPredicted RBP20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 HOOK2Q96ED9 719 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 RSRC1Q96IZ7 334 aaKnown RBP20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 CNOT10Q9H9A5 744 aaKnown RBP20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 FBXL5Q9UKA1 691 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
SFSWAP-207ENST00000538548 PPARDQ03181 441 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 GALNT17Q6IS24 598 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 GUF1Q8N442 669 aaKnown RBP20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 MAB21L3Q8N8X9 362 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 CALR3Q96L12 384 aaKnown RBP20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 NOD2Q9HC29 1040 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 NLRC4Q9NPP4 1024 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 ABCF2Q9UG63 623 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 PHF20L1A8MW92 1017 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 MAGOHP61326 146 aaKnown RBP20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 KCNMA1Q12791 1236 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 RPS6KA1Q15418 735 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 KIAA0753Q2KHM9 967 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 RCSD1Q6JBY9 416 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 LRRC55Q6ZSA7 311 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 ANKS1AQ92625 1134 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 CUL5Q93034 780 aa20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 MAGOHBQ96A72 148 aaKnown RBP20.39■□□□□ 0.85
SFSWAP-207ENST00000538548 LTBP4Q8N2S1 1624 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 KCNK3O14649 394 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 TRIM37O94972 964 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 OR52Z1P0C646 297 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 FAM83BQ5T0W9 1011 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 CRELD2Q6UXH1 353 aaPredicted RBP20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 ACTRT1Q8TDG2 376 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 TBC1D5Q92609 795 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 CHMP6Q96FZ7 201 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 PBKQ96KB5 322 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 NEUROG2Q9H2A3 272 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 DDX42Q86XP3 938 aaKnown RBP eCLIP20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 TANGO6Q9C0B7 1094 aa20.38■□□□□ 0.85
SFSWAP-207ENST00000538548 CCT8L1PA6NM43 557 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 F8W031 263 aaPredicted RBP20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 NAA25Q14CX7 972 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 HIBCHQ6NVY1 386 aaPredicted RBP20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 CENPTQ96BT3 561 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 PSMD1Q99460 953 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 PVALEFA0A1B0GWK0 134 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 DCDC2CA8MYV0 355 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 USP17L12C9JPN9 530 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 USP17L21D6R901 530 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 SART1O43290 800 aaKnown RBP20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 GSTA1P08263 222 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 DYNLL1P63167 89 aaKnown RBP20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 FAM47AQ5JRC9 791 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 ERMARDQ5T6L9 678 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 UNC13DQ70J99 1090 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 CCDC197Q8NCU1 140 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 PIGBQ92521 554 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 EBF2Q9HAK2 575 aa20.37■□□□□ 0.85
SFSWAP-207ENST00000538548 MYH7BA7E2Y1 1941 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 CICQ96RK0 1608 aaPredicted RBP20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 BTNL10A8MVZ5 291 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 ECM2O94769 699 aaPredicted RBP20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 NOL4O94818 638 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 KIF4AO95239 1232 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 CALRP27797 417 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 USP11P51784 963 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 PPP1R7Q15435 360 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 KRT71Q3SY84 523 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 TMC3Q7Z5M5 1100 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 ANKS4BQ8N8V4 417 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 TMOD3Q9NYL9 352 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 A0A087X0T9 212 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 FRMD3A2A2Y4 597 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 KIF3CO14782 793 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 PPP1R12BO60237 982 aaPredicted RBP20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 RPSAP08865 295 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 FAM228BP0C875 321 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 RIPK1Q13546 671 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 FOXR2Q6PJQ5 311 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 SV2BQ7L1I2 683 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 ACSBG1Q96GR2 724 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 XPO6Q96QU8 1125 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 BAIAP2L1Q9UHR4 511 aa20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 GOLGB1Q14789 3259 aaKnown RBP20.36■□□□□ 0.85
SFSWAP-207ENST00000538548 CALML4Q96GE6 196 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms