RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 AP3B2Q13367 1082 aa24.58■■□□□ 1.53
CCDC78-215ENST00000538176 PFKFB3Q16875 520 aaPredicted RBP24.58■■□□□ 1.53
CCDC78-215ENST00000538176 SCLYQ96I15 445 aa24.58■■□□□ 1.53
CCDC78-215ENST00000538176 UBIAD1Q9Y5Z9 338 aa24.58■■□□□ 1.53
CCDC78-215ENST00000538176 CYP46A1Q9Y6A2 500 aa24.58■■□□□ 1.53
CCDC78-215ENST00000538176 STXBP3O00186 592 aa24.57■■□□□ 1.52
CCDC78-215ENST00000538176 PRPF3O43395 683 aaKnown RBP24.57■■□□□ 1.52
CCDC78-215ENST00000538176 ZNF286BP0CG31 522 aa24.57■■□□□ 1.52
CCDC78-215ENST00000538176 SEMA3FQ13275 785 aa24.57■■□□□ 1.52
CCDC78-215ENST00000538176 MTMR1Q13613 665 aa24.57■■□□□ 1.52
CCDC78-215ENST00000538176 UBE2SQ16763 222 aa24.57■■□□□ 1.52
CCDC78-215ENST00000538176 GPR20Q99678 358 aa24.57■■□□□ 1.52
CCDC78-215ENST00000538176 JADE2Q9NQC1 790 aa24.57■■□□□ 1.52
CCDC78-215ENST00000538176 ZNF215Q9UL58 517 aaPredicted RBP24.57■■□□□ 1.52
CCDC78-215ENST00000538176 LGALS2P05162 132 aa24.56■■□□□ 1.52
CCDC78-215ENST00000538176 GNAT1P11488 350 aa24.56■■□□□ 1.52
CCDC78-215ENST00000538176 SCG2P13521 617 aa24.56■■□□□ 1.52
CCDC78-215ENST00000538176 RAB30Q15771 203 aa24.56■■□□□ 1.52
CCDC78-215ENST00000538176 OTOP2Q7RTS6 562 aa24.56■■□□□ 1.52
CCDC78-215ENST00000538176 SLC4A7Q9Y6M7 1214 aa24.56■■□□□ 1.52
CCDC78-215ENST00000538176 LAMA2P24043 3122 aaKnown RBP24.55■■□□□ 1.52
CCDC78-215ENST00000538176 ESYT2A0FGR8 921 aa24.55■■□□□ 1.52
CCDC78-215ENST00000538176 SELPP16109 830 aa24.55■■□□□ 1.52
CCDC78-215ENST00000538176 ITGB5P18084 799 aa24.55■■□□□ 1.52
CCDC78-215ENST00000538176 DNAJB2P25686 324 aa24.55■■□□□ 1.52
CCDC78-215ENST00000538176 GNA11P29992 359 aa24.55■■□□□ 1.52
CCDC78-215ENST00000538176 RNF26Q9BY78 433 aaPredicted RBP24.55■■□□□ 1.52
CCDC78-215ENST00000538176 C6orf50Q9HD87 102 aa24.55■■□□□ 1.52
CCDC78-215ENST00000538176 MSRAQ9UJ68 235 aa24.55■■□□□ 1.52
CCDC78-215ENST00000538176 SORBS3O60504 671 aa24.54■■□□□ 1.52
CCDC78-215ENST00000538176 TYW1BQ6NUM6 668 aa24.54■■□□□ 1.52
CCDC78-215ENST00000538176 SEPT1Q8WYJ6 367 aa24.54■■□□□ 1.52
CCDC78-215ENST00000538176 CTAGE1Q96RT6 745 aa24.54■■□□□ 1.52
CCDC78-215ENST00000538176 MXRA8Q9BRK3 442 aa24.54■■□□□ 1.52
CCDC78-215ENST00000538176 ZMYND12Q9H0C1 365 aa24.54■■□□□ 1.52
CCDC78-215ENST00000538176 C17orf102A2RUQ5 167 aa24.53■■□□□ 1.52
CCDC78-215ENST00000538176 KCNA2P16389 499 aa24.53■■□□□ 1.52
CCDC78-215ENST00000538176 IFNAR1P17181 557 aa24.53■■□□□ 1.52
CCDC78-215ENST00000538176 PDIA3P30101 505 aaKnown RBP24.53■■□□□ 1.52
CCDC78-215ENST00000538176 CLK2P49760 499 aaKnown RBP24.53■■□□□ 1.52
CCDC78-215ENST00000538176 DEFB128Q7Z7B8 93 aa24.53■■□□□ 1.52
CCDC78-215ENST00000538176 PHOSPHO2Q8TCD6 241 aa24.53■■□□□ 1.52
CCDC78-215ENST00000538176 PPP1R13LQ8WUF5 828 aa24.53■■□□□ 1.52
CCDC78-215ENST00000538176 TIFAQ96CG3 184 aa24.53■■□□□ 1.52
CCDC78-215ENST00000538176 ZNF274Q96GC6 653 aaPredicted RBP24.53■■□□□ 1.52
CCDC78-215ENST00000538176 ANO3Q9BYT9 981 aa24.53■■□□□ 1.52
CCDC78-215ENST00000538176 FTOQ9C0B1 505 aaKnown RBP eCLIP24.53■■□□□ 1.52
CCDC78-215ENST00000538176 BAIAP3O94812 1187 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 CKBP12277 381 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 CEP55Q53EZ4 464 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 LRRC8DQ7L1W4 858 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 BICD2Q8TD16 824 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 TNPO1Q92973 898 aaKnown RBP24.52■■□□□ 1.52
CCDC78-215ENST00000538176 FAM161BQ96MY7 647 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 GUCD1Q96NT3 240 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 PBX4Q9BYU1 374 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 BCAS3Q9H6U6 928 aa24.52■■□□□ 1.52
CCDC78-215ENST00000538176 CXXC1Q9P0U4 656 aaPredicted RBP24.52■■□□□ 1.52
CCDC78-215ENST00000538176 ZBBXA8MT70 800 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 ATP9AO75110 1047 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 HOXC8P31273 242 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 SREBF1P36956 1147 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 NTRK3Q16288 839 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 CPLX2Q6PUV4 134 aaKnown RBP24.51■■□□□ 1.51
CCDC78-215ENST00000538176 SERINC5Q86VE9 423 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 TRIM22Q8IYM9 498 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 CCDC148Q8NFR7 591 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 ATP6V0A1Q93050 837 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 VWCEQ96DN2 955 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 CDX2Q99626 313 aaPredicted RBP24.51■■□□□ 1.51
CCDC78-215ENST00000538176 TTYH1Q9H313 450 aaPredicted RBP24.51■■□□□ 1.51
CCDC78-215ENST00000538176 ZNF576Q9H609 170 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 KCNH7Q9NS40 1196 aa24.51■■□□□ 1.51
CCDC78-215ENST00000538176 TRIP12Q14669 1992 aaPredicted RBP24.51■■□□□ 1.51
CCDC78-215ENST00000538176 CAND2O75155 1236 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 SMIM10L2AP0DMW4 78 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 SMIM10L2BP0DMW5 78 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 TCF7P36402 384 aaPredicted RBP24.5■■□□□ 1.51
CCDC78-215ENST00000538176 ZNF76P36508 570 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 ANAPC15P60006 121 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 NIPA1Q7RTP0 329 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 SLC9A7Q96T83 725 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 SDF4Q9BRK5 362 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 RNPEPQ9H4A4 650 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 SH3GLB2Q9NR46 395 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 NRCAMQ92823 1304 aa24.5■■□□□ 1.51
CCDC78-215ENST00000538176 EFCAB14O75071 495 aa24.49■■□□□ 1.51
CCDC78-215ENST00000538176 TOB2Q14106 344 aaPredicted RBP24.49■■□□□ 1.51
CCDC78-215ENST00000538176 PKN1Q16512 942 aa24.49■■□□□ 1.51
CCDC78-215ENST00000538176 FAM177A1Q8N128 213 aaPredicted RBP24.49■■□□□ 1.51
CCDC78-215ENST00000538176 DHX38Q92620 1227 aaKnown RBP24.49■■□□□ 1.51
CCDC78-215ENST00000538176 SMARCAD1Q9H4L7 1026 aa24.49■■□□□ 1.51
CCDC78-215ENST00000538176 JPH1Q9HDC5 661 aaPredicted RBP24.49■■□□□ 1.51
CCDC78-215ENST00000538176 ERAP1Q9NZ08 941 aa24.49■■□□□ 1.51
CCDC78-215ENST00000538176 NFASCO94856 1347 aa24.49■■□□□ 1.51
CCDC78-215ENST00000538176 EMSYQ7Z589 1322 aa24.49■■□□□ 1.51
CCDC78-215ENST00000538176 MEIS1O00470 390 aa24.48■■□□□ 1.51
CCDC78-215ENST00000538176 CPLX1O14810 134 aa24.48■■□□□ 1.51
CCDC78-215ENST00000538176 CXCL10P02778 98 aa24.48■■□□□ 1.51
CCDC78-215ENST00000538176 CYP3A4P08684 503 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms