RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ADCY7P51828 1080 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 ITGB3BPQ13352 177 aaPredicted RBP9.63□□□□□ -0.87
SPARC-208ENST00000538026 GDF6Q6KF10 455 aaPredicted RBP9.63□□□□□ -0.87
SPARC-208ENST00000538026 NFRKBQ6P4R8 1299 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 DHX38Q92620 1227 aaKnown RBP9.63□□□□□ -0.87
SPARC-208ENST00000538026 SPATA33Q96N06 139 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 GPR20Q99678 358 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 SENP7Q9BQF6 1050 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 MXRA8Q9BRK3 442 aa9.63□□□□□ -0.87
SPARC-208ENST00000538026 UBE2OQ9C0C9 1292 aaKnown RBP9.63□□□□□ -0.87
SPARC-208ENST00000538026 IGLV3-22A0A075B6J6 115 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 A0A1W2PPC1 479 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 hCG_1984214I3L0E3 225 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 DHX15O43143 795 aaKnown RBP9.62□□□□□ -0.87
SPARC-208ENST00000538026 CSF2RAP15509 400 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 RAG1P15918 1043 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 HOXC8P31273 242 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 PSEN2P49810 448 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 NEK4P51957 841 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 ARHGAP4P98171 946 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 DGKDQ16760 1214 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 MFSD5Q6N075 450 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 TRAF7Q6Q0C0 670 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 METTL7BQ6UX53 244 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 SESTD1Q86VW0 696 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 TDHQ8IZJ6 230 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 ZNF713Q8N859 430 aaPredicted RBP9.62□□□□□ -0.87
SPARC-208ENST00000538026 LENG9Q96B70 501 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 GPRASP2Q96D09 838 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 UIMC1Q96RL1 719 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 PCYT2Q99447 389 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 PPP1R12CQ9BZL4 782 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 KCNH7Q9NS40 1196 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 HDAC6Q9UBN7 1215 aa9.62□□□□□ -0.87
SPARC-208ENST00000538026 MROH7Q68CQ1 1323 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 JAK2O60674 1132 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 SLC34A2O95436 690 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 CCNE2O96020 404 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 FOSP01100 380 aaPredicted RBP9.61□□□□□ -0.87
SPARC-208ENST00000538026 LGALS2P05162 132 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 CYP3A4P08684 503 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 ACRP10323 421 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 CCL23P55773 120 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 SSRP1Q08945 709 aaKnown RBP9.61□□□□□ -0.87
SPARC-208ENST00000538026 NEDD9Q14511 834 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 MFSD10Q14728 455 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 KIAA0753Q2KHM9 967 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 TCTN1Q2MV58 587 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 TRIM71Q2Q1W2 868 aaKnown RBP9.61□□□□□ -0.87
SPARC-208ENST00000538026 LRIT3Q3SXY7 679 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 GNPTABQ3T906 1256 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 CEP55Q53EZ4 464 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 TMEM240Q5SV17 173 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 RASIP1Q5U651 963 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 FAM109BQ6ICB4 259 aaPredicted RBP9.61□□□□□ -0.87
SPARC-208ENST00000538026 TEX2Q8IWB9 1127 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 GTF3C6Q969F1 213 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 LBHD1Q9BQE6 289 aaPredicted RBP9.61□□□□□ -0.87
SPARC-208ENST00000538026 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.61□□□□□ -0.87
SPARC-208ENST00000538026 OSBPL7Q9BZF2 842 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 RNPEPQ9H4A4 650 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 MLXIPQ9HAP2 919 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 AGO4Q9HCK5 861 aaKnown RBP9.61□□□□□ -0.87
SPARC-208ENST00000538026 PKD2L1Q9P0L9 805 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 GTF2IRD1Q9UHL9 959 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 KCNJ14Q9UNX9 436 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 EVPLQ92817 2033 aa9.61□□□□□ -0.87
SPARC-208ENST00000538026 PTPRSQ13332 1948 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 CD2BP2O95400 341 aaKnown RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 CIITAP33076 1130 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 RBM25P49756 843 aaKnown RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 CHMP4BP1P59074 171 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 ADAM17P78536 824 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 SP4Q02446 784 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 PTPN11Q06124 597 aaPredicted RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 AP3B2Q13367 1082 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 MTMR1Q13613 665 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 FAM47CQ5HY64 1035 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 EARS2Q5JPH6 523 aaKnown RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 NLRX1Q86UT6 975 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 REXO1Q8N1G1 1221 aaKnown RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 NSUN7Q8NE18 718 aaKnown RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 OXER1Q8TDS5 423 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 GJA10Q969M2 543 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 SCLYQ96I15 445 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 ALG1Q9BT22 464 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 SEZ6LQ9BYH1 1024 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 SLKQ9H2G2 1235 aaPredicted RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 HIPK3Q9H422 1215 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 C6orf50Q9HD87 102 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 SH3GLB2Q9NR46 395 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 CXXC1Q9P0U4 656 aaPredicted RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 PRKAG2Q9UGJ0 569 aa9.6□□□□□ -0.87
SPARC-208ENST00000538026 MYH9P35579 1960 aaKnown RBP9.6□□□□□ -0.87
SPARC-208ENST00000538026 GBF1Q92538 1859 aa9.59□□□□□ -0.87
SPARC-208ENST00000538026 TANC1Q9C0D5 1861 aa9.59□□□□□ -0.87
SPARC-208ENST00000538026 STK36Q9NRP7 1315 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms