RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 BCAS3Q9H6U6 928 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 RTEL1Q9NZ71 1219 aa22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 SEC63Q9UGP8 760 aaKnown RBP22.71■■□□□ 1.23
TNFRSF1B-204ENST00000536782 SPATA31C2B4DYI2 1134 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 FIBPO43427 364 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 PRC1O43663 620 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 LGALS2P05162 132 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 THPOP40225 353 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 METTL7BQ6UX53 244 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 TMTC2Q8N394 836 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 ATP6V0A1Q93050 837 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 LZTS2Q9BRK4 669 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 USP26Q9BXU7 913 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 EMSYQ7Z589 1322 aa22.7■■□□□ 1.22
TNFRSF1B-204ENST00000536782 DOCK5Q9H7D0 1870 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 LCHNA4D1U4 455 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 RSPH10B2B2RC85 870 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 LGR5O75473 907 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 GJB5O95377 273 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 RSPH10BP0C881 870 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SMIM10L2AP0DMW4 78 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SMIM10L2BP0DMW5 78 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 MCM5P33992 734 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 GNAQP50148 359 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 MBTPS1Q14703 1052 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 AAK1Q2M2I8 961 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 USP17L6PQ6QN14 398 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 NFXL1Q6ZNB6 911 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 CYFIP1Q7L576 1253 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SPRED2Q7Z698 418 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 RAD9AQ99638 391 aa22.69■■□□□ 1.22
TNFRSF1B-204ENST00000536782 CCDC69A6NI79 296 aa22.68■■□□□ 1.22
TNFRSF1B-204ENST00000536782 PIK3CDO00329 1044 aa22.68■■□□□ 1.22
TNFRSF1B-204ENST00000536782 GRB10Q13322 594 aa22.68■■□□□ 1.22
TNFRSF1B-204ENST00000536782 PCNX4Q63HM2 1172 aa22.68■■□□□ 1.22
TNFRSF1B-204ENST00000536782 KRT40Q6A162 431 aa22.68■■□□□ 1.22
TNFRSF1B-204ENST00000536782 XRRA1Q6P2D8 792 aa22.68■■□□□ 1.22
TNFRSF1B-204ENST00000536782 TMEM87BQ96K49 555 aa22.68■■□□□ 1.22
TNFRSF1B-204ENST00000536782 UHRF1Q96T88 793 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF1B-204ENST00000536782 MICAL3Q7RTP6 2002 aa22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SH2B2O14492 632 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 MEIS2O14770 477 aa22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 HOXC8P31273 242 aa22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 TFF2Q03403 129 aa22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SEMA3FQ13275 785 aa22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 GPR20Q99678 358 aa22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 LSG1Q9H089 658 aaKnown RBP22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 RNPEPQ9H4A4 650 aa22.67■■□□□ 1.22
TNFRSF1B-204ENST00000536782 PLEKHA8P1O95397 391 aa22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 CALM1P0DP23 149 aa22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 CALM2P0DP24 149 aa22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 CALM3P0DP25 149 aa22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 NLRX1Q86UT6 975 aa22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SRBD1Q8N5C6 995 aaKnown RBP22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 DBF4BQ8NFT6 615 aa22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SENP7Q9BQF6 1050 aa22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 ZNF215Q9UL58 517 aaPredicted RBP22.66■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SLC27A2O14975 620 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 TREHO43280 583 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 LPXNO60711 386 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 GNAT1P11488 350 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 BMP1P13497 986 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 LIFRP42702 1097 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 FAM117BQ6P1L5 589 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 NECAB3Q96P71 396 aaPredicted RBP22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 COG5Q9UP83 839 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 SIP14410 1827 aa22.65■■□□□ 1.22
TNFRSF1B-204ENST00000536782 CAND2O75155 1236 aa22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 AMHP03971 560 aa22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 PLEKHG4Q58EX7 1191 aa22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 UTP14CQ5TAP6 766 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 CMTR1Q8N1G2 835 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 GIMAP8Q8ND71 665 aaPredicted RBP22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 TGS1Q96RS0 853 aaKnown RBP22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 ESYT1Q9BSJ8 1104 aa22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 PSTPIP2Q9H939 334 aa22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SETD4Q9NVD3 440 aa22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 LMCD1Q9NZU5 365 aa22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 MTUS1Q9ULD2 1270 aa22.64■■□□□ 1.21
TNFRSF1B-204ENST00000536782 LINC01553A4QN01 128 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 RXRAP19793 462 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 KCNQ1P51787 676 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 ERVK-21P61565 698 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SP4Q02446 784 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 CREB3L3Q68CJ9 461 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 TRIM50Q86XT4 487 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 GDPD5Q8WTR4 605 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 INSL6Q9Y581 213 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SLC12A7Q9Y666 1083 aa22.63■■□□□ 1.21
TNFRSF1B-204ENST00000536782 CTSHP09668 335 aa22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 MKRN4PQ13434 485 aaPredicted RBP22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 NECTIN1Q15223 517 aa22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 MYOCDQ8IZQ8 938 aa22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SEPT8Q92599 483 aa22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 HLA-CQ95604 372 aa22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 GPRASP2Q96D09 838 aa22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 CDHR1Q96JP9 859 aa22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 SUGCTQ9HAC7 445 aa22.62■■□□□ 1.21
TNFRSF1B-204ENST00000536782 TELO2Q9Y4R8 837 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms