RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 SP8Q8IXZ3 490 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 TTLL6Q8N841 843 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 MARCH10Q8NA82 808 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-205ENST00000535375 KYQ8NBH2 561 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 FBXW5Q969U6 566 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 MAGEB10Q96LZ2 347 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-205ENST00000535375 GORASP1Q9BQQ3 440 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 C11orf84Q9BUA3 381 aaPredicted RBP7.65□□□□□ -1.18
PRKDC-205ENST00000535375 PARD6AQ9NPB6 346 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 NTMQ9P121 344 aa7.65□□□□□ -1.18
PRKDC-205ENST00000535375 NKRFO15226 690 aaKnown RBP eCLIP7.64□□□□□ -1.19
PRKDC-205ENST00000535375 CRTAMO95727 393 aa7.64□□□□□ -1.19
PRKDC-205ENST00000535375 TUSC3Q13454 348 aa7.64□□□□□ -1.19
PRKDC-205ENST00000535375 CR1LQ2VPA4 569 aa7.64□□□□□ -1.19
PRKDC-205ENST00000535375 FAM47CQ5HY64 1035 aa7.64□□□□□ -1.19
PRKDC-205ENST00000535375 STK32CQ86UX6 486 aa7.64□□□□□ -1.19
PRKDC-205ENST00000535375 LINC00482Q8N8I6 264 aa7.64□□□□□ -1.19
PRKDC-205ENST00000535375 PCDH19Q8TAB3 1148 aa7.64□□□□□ -1.19
PRKDC-205ENST00000535375 UHMK1Q8TAS1 419 aaKnown RBP7.64□□□□□ -1.19
PRKDC-205ENST00000535375 ZNF526Q8TF50 670 aaPredicted RBP7.64□□□□□ -1.19
PRKDC-205ENST00000535375 SFMBT1Q9UHJ3 866 aa7.64□□□□□ -1.19
PRKDC-205ENST00000535375 TRIM13O60858 407 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 INHBBP09529 407 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 KCNC1P48547 511 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 VWA3BQ502W6 1294 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 TEPPQ6URK8 271 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 RBM12BQ8IXT5 1001 aaKnown RBP7.63□□□□□ -1.19
PRKDC-205ENST00000535375 ADGRG2Q8IZP9 1017 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 CLEC4DQ8WXI8 215 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 SYT3Q9BQG1 590 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 MRPL4Q9BYD3 311 aaKnown RBP7.63□□□□□ -1.19
PRKDC-205ENST00000535375 SLC52A2Q9HAB3 445 aa7.63□□□□□ -1.19
PRKDC-205ENST00000535375 SH3D21A4FU49 640 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 ARVCFO00192 962 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 PYGMP11217 842 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 SARSP49591 514 aaKnown RBP7.62□□□□□ -1.19
PRKDC-205ENST00000535375 SLURP1P55000 103 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 CRY1Q16526 586 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 LIPIQ6XZB0 460 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 ARHGAP36Q6ZRI8 547 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 C16orf59Q7L2K0 433 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-205ENST00000535375 NLGN4XQ8N0W4 816 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 TP53I13Q8NBR0 393 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-205ENST00000535375 TTLL11Q8NHH1 800 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 CLIC6Q96NY7 704 aa7.62□□□□□ -1.19
PRKDC-205ENST00000535375 A0A1B0GTL3 188 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 LRG1P02750 347 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 KRT15P19012 456 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 DNM2P50570 870 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 ITGA1P56199 1179 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 GPR19Q15760 415 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 HABP4Q5JVS0 413 aaKnown RBP7.61□□□□□ -1.19
PRKDC-205ENST00000535375 LCE4AQ5TA78 99 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 KCTD1Q719H9 257 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 CARFQ8N187 725 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 SH3TC2Q8TF17 1288 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 KCNC2Q96PR1 638 aa7.61□□□□□ -1.19
PRKDC-205ENST00000535375 LUC7LQ9NQ29 371 aaKnown RBP7.61□□□□□ -1.19
PRKDC-205ENST00000535375 SPATA6Q9NWH7 488 aaPredicted RBP7.61□□□□□ -1.19
PRKDC-205ENST00000535375 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.6□□□□□ -1.19
PRKDC-205ENST00000535375 WNT9AO14904 365 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 CYP7B1O75881 506 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 LTFP02788 710 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 PDE6AP16499 860 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 THBS2P35442 1172 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 PAN2Q504Q3 1202 aaKnown RBP7.6□□□□□ -1.19
PRKDC-205ENST00000535375 TRIM61Q5EBN2 209 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 OSTM1Q86WC4 334 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 GSTCDQ8NEC7 633 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 SLC7A14Q8TBB6 771 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 TMEM209Q96SK2 561 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 CD244Q9BZW8 370 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 NCOA5Q9HCD5 579 aaKnown RBP7.6□□□□□ -1.19
PRKDC-205ENST00000535375 USP40Q9NVE5 1235 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 USP35Q9P2H5 1018 aa7.6□□□□□ -1.19
PRKDC-205ENST00000535375 CCDC66A2RUB6 948 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 PLD2O14939 933 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 RASGRP1O95267 797 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 DLX2Q07687 328 aaPredicted RBP7.59□□□□□ -1.19
PRKDC-205ENST00000535375 PRAMEF18Q5VWM3 479 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 VASNQ6EMK4 673 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 TMC5Q6UXY8 1006 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 TTLL10Q6ZVT0 673 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 FEZF2Q8TBJ5 459 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 WRNIP1Q96S55 665 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 SPATA25Q9BR10 227 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 KRTAP4-7Q9BYR0 210 aa7.59□□□□□ -1.19
PRKDC-205ENST00000535375 FAHP16930 419 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 RPL13P26373 211 aaKnown RBP7.58□□□□□ -1.2
PRKDC-205ENST00000535375 EPHA5P54756 1037 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 BTBD8Q5XKL5 378 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 BRAPQ7Z569 592 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 PTRH1Q86Y79 214 aaKnown RBP7.58□□□□□ -1.2
PRKDC-205ENST00000535375 ZDHHC14Q8IZN3 488 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 SYT8Q8NBV8 401 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 ZSWIM3Q96MP5 696 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 PIF1Q9H611 641 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 HSPBP1Q9NZL4 362 aa7.58□□□□□ -1.2
PRKDC-205ENST00000535375 CROTQ9UKG9 612 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms