RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 NCOA7Q8NI08 942 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 HLA-CQ95604 372 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 NECAB3Q96P71 396 aaPredicted RBP14.5□□□□□ -0.09
USF1-211ENST00000534633 MLXIPQ9HAP2 919 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 ANO2Q9NQ90 1003 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 RALGAPA2Q2PPJ7 1873 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 E7EWF7 191 aa14.49□□□□□ -0.09
USF1-211ENST00000534633 H3BRB1 525 aa14.49□□□□□ -0.09
USF1-211ENST00000534633 LGR5O75473 907 aa14.49□□□□□ -0.09
USF1-211ENST00000534633 HOXC8P31273 242 aa14.49□□□□□ -0.09
USF1-211ENST00000534633 ICAM3P32942 547 aa14.49□□□□□ -0.09
USF1-211ENST00000534633 ERVK-21P61565 698 aa14.49□□□□□ -0.09
USF1-211ENST00000534633 HIC1Q14526 733 aa14.49□□□□□ -0.09
USF1-211ENST00000534633 TGS1Q96RS0 853 aaKnown RBP14.49□□□□□ -0.09
USF1-211ENST00000534633 TUT1Q9H6E5 874 aaKnown RBP14.49□□□□□ -0.09
USF1-211ENST00000534633 SENP2Q9HC62 589 aa14.49□□□□□ -0.09
USF1-211ENST00000534633 C17orf102A2RUQ5 167 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 LINC01553A4QN01 128 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 RSPH10B2B2RC85 870 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 NOP56O00567 594 aaKnown RBP14.48□□□□□ -0.09
USF1-211ENST00000534633 SLC27A2O14975 620 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 SORBS3O60504 671 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 LGALS2P05162 132 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 RSPH10BP0C881 870 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 THPOP40225 353 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 MRPS9P82933 396 aaKnown RBP14.48□□□□□ -0.09
USF1-211ENST00000534633 GDPD5Q8WTR4 605 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 GPKOWQ92917 476 aaPredicted RBP eCLIP14.48□□□□□ -0.09
USF1-211ENST00000534633 ATP6V0A1Q93050 837 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 INPP4AQ96PE3 977 aaPredicted RBP14.48□□□□□ -0.09
USF1-211ENST00000534633 USP26Q9BXU7 913 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 SUGCTQ9HAC7 445 aa14.48□□□□□ -0.09
USF1-211ENST00000534633 COL4A6Q14031 1691 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 CAND2O75155 1236 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 AMHP03971 560 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 SMIM10L2AP0DMW4 78 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 SMIM10L2BP0DMW5 78 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 MKRN4PQ13434 485 aaPredicted RBP14.47□□□□□ -0.09
USF1-211ENST00000534633 NEDD9Q14511 834 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 PLEKHG4Q58EX7 1191 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 CREB3L3Q68CJ9 461 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 CASC1Q6TDU7 716 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 METTL7BQ6UX53 244 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 CATIPQ7Z7H3 387 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 RASEFQ8IZ41 740 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 DBF4BQ8NFT6 615 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 ZFP91Q96JP5 570 aaPredicted RBP14.47□□□□□ -0.09
USF1-211ENST00000534633 MAP3K14Q99558 947 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 MTUS1Q9ULD2 1270 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 INSL6Q9Y581 213 aa14.47□□□□□ -0.09
USF1-211ENST00000534633 SPATA31C2B4DYI2 1134 aa14.46□□□□□ -0.09
USF1-211ENST00000534633 FIBPO43427 364 aa14.46□□□□□ -0.09
USF1-211ENST00000534633 FAM117BQ6P1L5 589 aa14.46□□□□□ -0.09
USF1-211ENST00000534633 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.46□□□□□ -0.09
USF1-211ENST00000534633 IGDCC4Q8TDY8 1250 aa14.46□□□□□ -0.09
USF1-211ENST00000534633 SPZ1Q9BXG8 430 aa14.46□□□□□ -0.09
USF1-211ENST00000534633 C1QTNF1Q9BXJ1 281 aa14.46□□□□□ -0.09
USF1-211ENST00000534633 RNPEPQ9H4A4 650 aa14.46□□□□□ -0.09
USF1-211ENST00000534633 BCAS3Q9H6U6 928 aa14.46□□□□□ -0.09
USF1-211ENST00000534633 TREHO43280 583 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 DDAH1O94760 285 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 GNAT1P11488 350 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 SMARCA1P28370 1054 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 KIF5BP33176 963 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 ANTXR2P58335 489 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 HTRA4P83105 476 aaPredicted RBP14.45□□□□□ -0.1
USF1-211ENST00000534633 SEMA3FQ13275 785 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 XRRA1Q6P2D8 792 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 CYFIP1Q7L576 1253 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 MB21D2Q8IYB1 491 aaPredicted RBP14.45□□□□□ -0.1
USF1-211ENST00000534633 ZNF654Q8IZM8 581 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 MYOCDQ8IZQ8 938 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 CTCFLQ8NI51 663 aaPredicted RBP14.45□□□□□ -0.1
USF1-211ENST00000534633 SMARCC2Q8TAQ2 1214 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 SP7Q8TDD2 431 aaPredicted RBP14.45□□□□□ -0.1
USF1-211ENST00000534633 KCNB2Q92953 911 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 CUL5Q93034 780 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 RRP36Q96EU6 259 aaKnown RBP14.45□□□□□ -0.1
USF1-211ENST00000534633 GPR20Q99678 358 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 SENP7Q9BQF6 1050 aa14.45□□□□□ -0.1
USF1-211ENST00000534633 ZNF215Q9UL58 517 aaPredicted RBP14.45□□□□□ -0.1
USF1-211ENST00000534633 PIK3CDO00329 1044 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 SEC24BO95487 1268 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 TSGA10IPQ3SY00 556 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 PCNX4Q63HM2 1172 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 GIMAP8Q8ND71 665 aaPredicted RBP14.44□□□□□ -0.1
USF1-211ENST00000534633 FBXO22Q8NEZ5 403 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 PIBF1Q8WXW3 757 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 SEPT8Q92599 483 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 SAMD11Q96NU1 681 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 LZTS2Q9BRK4 669 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 MTA3Q9BTC8 594 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 LY9Q9HBG7 655 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 RTEL1Q9NZ71 1219 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 ATG2AQ2TAZ0 1938 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 LOXHD1Q8IVV2 1947 aa14.44□□□□□ -0.1
USF1-211ENST00000534633 HSPA4P34932 840 aa14.43□□□□□ -0.1
USF1-211ENST00000534633 ADCK5Q3MIX3 580 aa14.43□□□□□ -0.1
USF1-211ENST00000534633 NLRX1Q86UT6 975 aa14.43□□□□□ -0.1
USF1-211ENST00000534633 C17orf80Q9BSJ5 609 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms