RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 CPT1AP50416 773 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 RCAN1P53805 252 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 AK2P54819 239 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 NAPAP54920 295 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 CCL23P55773 120 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 ADAM17P78536 824 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 SCRN1Q12765 414 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 ITGB3BPQ13352 177 aaPredicted RBP5.82□□□□□ -1.48
USH1C-210ENST00000534556 MBTPS1Q14703 1052 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 LRIT3Q3SXY7 679 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 RASIP1Q5U651 963 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 JAKMIP3Q5VZ66 844 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 CYFIP1Q7L576 1253 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 DHX37Q8IY37 1157 aaKnown RBP5.82□□□□□ -1.48
USH1C-210ENST00000534556 NECAB1Q8N987 351 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 PPTC7Q8NI37 304 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 SMARCC2Q8TAQ2 1214 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 ZBTB10Q96DT7 871 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 GPR20Q99678 358 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 ANO3Q9BYT9 981 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 PKD2L1Q9P0L9 805 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 CXXC1Q9P0U4 656 aaPredicted RBP5.82□□□□□ -1.48
USH1C-210ENST00000534556 VPS54Q9P1Q0 977 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 SEC63Q9UGP8 760 aaKnown RBP5.82□□□□□ -1.48
USH1C-210ENST00000534556 TRIP11Q15643 1979 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 PRRC2BQ5JSZ5 2229 aaKnown RBP5.82□□□□□ -1.48
USH1C-210ENST00000534556 MYH15Q9Y2K3 1946 aa5.82□□□□□ -1.48
USH1C-210ENST00000534556 PLXNA4Q9HCM2 1894 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 TCF20Q9UGU0 1960 aaKnown RBP5.81□□□□□ -1.48
USH1C-210ENST00000534556 FAM205CA6NFA0 338 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 FAM86B1E9PN63 330 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 MEIS1O00470 390 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 DHX15O43143 795 aaKnown RBP5.81□□□□□ -1.48
USH1C-210ENST00000534556 FIBPO43427 364 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 PFKFB2O60825 505 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 CABYRO75952 493 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 ARHGEF15O94989 841 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 LGALS2P05162 132 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 FAM86B2P0C5J1 330 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 TGFB3P10600 412 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 PSMA5P28066 241 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 SREBF1P36956 1147 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 PBX2P40425 430 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 CHMP4BP1P59074 171 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 FPGSQ05932 587 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 LAMC2Q13753 1193 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 MFSD10Q14728 455 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 ME3Q16798 604 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 KIAA0753Q2KHM9 967 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 FAM47CQ5HY64 1035 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 EARS2Q5JPH6 523 aaKnown RBP5.81□□□□□ -1.48
USH1C-210ENST00000534556 NFRKBQ6P4R8 1299 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 SYNE3Q6ZMZ3 975 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 ZNF365Q70YC5 407 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 SPRED2Q7Z698 418 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 SESTD1Q86VW0 696 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 GJA10Q969M2 543 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 LENG9Q96B70 501 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 ZNF274Q96GC6 653 aaPredicted RBP5.81□□□□□ -1.48
USH1C-210ENST00000534556 SPATA33Q96N06 139 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 LBHD1Q9BQE6 289 aaPredicted RBP5.81□□□□□ -1.48
USH1C-210ENST00000534556 MXRA8Q9BRK3 442 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 ALG1Q9BT22 464 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 SLC26A6Q9BXS9 759 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 RNF26Q9BY78 433 aaPredicted RBP5.81□□□□□ -1.48
USH1C-210ENST00000534556 ZMYND12Q9H0C1 365 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 TTYH1Q9H313 450 aaPredicted RBP5.81□□□□□ -1.48
USH1C-210ENST00000534556 HIPK3Q9H422 1215 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 RNPEPQ9H4A4 650 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 JADE2Q9NQC1 790 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 PDRG1Q9NUG6 133 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 GTF2IRD1Q9UHL9 959 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 CYP46A1Q9Y6A2 500 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 RALGAPA2Q2PPJ7 1873 aa5.81□□□□□ -1.48
USH1C-210ENST00000534556 MROH7Q68CQ1 1323 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 MUC3AQ02505 3323 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 ESYT2A0FGR8 921 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 B4DLN1 442 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 WNT7AO00755 349 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 TREHO43280 583 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 JAK2O60674 1132 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 NBNO60934 754 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 PPFIA4O75335 1185 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 CD2BP2O95400 341 aaKnown RBP5.8□□□□□ -1.48
USH1C-210ENST00000534556 CCNE2O96020 404 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 ATP4AP20648 1035 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 ADCY7P51828 1080 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 MRPL12P52815 198 aaKnown RBP5.8□□□□□ -1.48
USH1C-210ENST00000534556 ARHGAP4P98171 946 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 SP4Q02446 784 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 TRAF1Q13077 416 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 DGKDQ16760 1214 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 MARCH8Q5T0T0 291 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 UTP14CQ5TAP6 766 aaKnown RBP5.8□□□□□ -1.48
USH1C-210ENST00000534556 PPP1R18Q6NYC8 613 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 METTL7BQ6UX53 244 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 OXER1Q8TDS5 423 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 CUL5Q93034 780 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 GPRASP2Q96D09 838 aa5.8□□□□□ -1.48
USH1C-210ENST00000534556 GUCD1Q96NT3 240 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms