RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	THEG	Q9P2T0	379 aa		27.96	■■■□□ 2.07
RELA-223	ENST00000534283	SEC63	Q9UGP8	760 aa	Known RBP	27.96	■■■□□ 2.07
RELA-223	ENST00000534283	MTCH2	Q9Y6C9	303 aa		27.96	■■■□□ 2.07
RELA-223	ENST00000534283	BAZ2B	Q9UIF8	2168 aa	Known RBP	27.96	■■■□□ 2.07
RELA-223	ENST00000534283	SMIM10L2A	P0DMW4	78 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	SMIM10L2B	P0DMW5	78 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	CALM1	P0DP23	149 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	CALM2	P0DP24	149 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	CALM3	P0DP25	149 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	KCNJ6	P48051	423 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	MKRN4P	Q13434	485 aa	Predicted RBP	27.95	■■■□□ 2.06
RELA-223	ENST00000534283	BMP2KL	Q5H9B9	411 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	SPRED2	Q7Z698	418 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	CUL5	Q93034	780 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	SENP7	Q9BQF6	1050 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	USP26	Q9BXU7	913 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	LRRC2	Q9BYS8	371 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	RNPEP	Q9H4A4	650 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	ANO2	Q9NQ90	1003 aa		27.95	■■■□□ 2.06
RELA-223	ENST00000534283	TET1	Q8NFU7	2136 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	TANC1	Q9C0D5	1861 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	C17orf102	A2RUQ5	167 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	LCHN	A4D1U4	455 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	TLL1	O43897	1013 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	SGMS1	Q86VZ5	419 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	RAB11FIP4	Q86YS3	637 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	FANCB	Q8NB91	859 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	PSTPIP2	Q9H939	334 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	SLC12A7	Q9Y666	1083 aa		27.94	■■■□□ 2.06
RELA-223	ENST00000534283	MYH6	P13533	1939 aa		27.93	■■■□□ 2.06
RELA-223	ENST00000534283	TREH	O43280	583 aa		27.93	■■■□□ 2.06
RELA-223	ENST00000534283	LGR5	O75473	907 aa		27.93	■■■□□ 2.06
RELA-223	ENST00000534283	TMTC3	Q6ZXV5	915 aa		27.93	■■■□□ 2.06
RELA-223	ENST00000534283	ARNTL2	Q8WYA1	636 aa		27.93	■■■□□ 2.06
RELA-223	ENST00000534283	ATP6V0A1	Q93050	837 aa		27.93	■■■□□ 2.06
RELA-223	ENST00000534283	hCG_1642624	A0A1W2PR95	340 aa		27.92	■■■□□ 2.06
RELA-223	ENST00000534283	RSPH10B2	B2RC85	870 aa		27.92	■■■□□ 2.06
RELA-223	ENST00000534283	NOP56	O00567	594 aa	Known RBP	27.92	■■■□□ 2.06
RELA-223	ENST00000534283	RSPH10B	P0C881	870 aa		27.92	■■■□□ 2.06
RELA-223	ENST00000534283	THPO	P40225	353 aa		27.92	■■■□□ 2.06
RELA-223	ENST00000534283	MRPS5	P82675	430 aa	Known RBP	27.92	■■■□□ 2.06
RELA-223	ENST00000534283	IKBKE	Q14164	716 aa		27.92	■■■□□ 2.06
RELA-223	ENST00000534283	EFCAB14	O75071	495 aa		27.91	■■■□□ 2.06
RELA-223	ENST00000534283	ATP9A	O75110	1047 aa		27.91	■■■□□ 2.06
RELA-223	ENST00000534283	GJB5	O95377	273 aa		27.91	■■■□□ 2.06
RELA-223	ENST00000534283	ITGB5	P18084	799 aa		27.91	■■■□□ 2.06
RELA-223	ENST00000534283	ADAM17	P78536	824 aa		27.91	■■■□□ 2.06
RELA-223	ENST00000534283	TRIM50	Q86XT4	487 aa		27.91	■■■□□ 2.06
RELA-223	ENST00000534283	GBF1	Q92538	1859 aa		27.91	■■■□□ 2.06
RELA-223	ENST00000534283	LPXN	O60711	386 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	EXOSC10	Q01780	885 aa	Known RBP	27.9	■■■□□ 2.06
RELA-223	ENST00000534283	KRT40	Q6A162	431 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	NLRX1	Q86UT6	975 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	CCDC82	Q8N4S0	544 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	DBF4B	Q8NFT6	615 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	GPRASP2	Q96D09	838 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	RAD9A	Q99638	391 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	OSBPL7	Q9BZF2	842 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	SETD4	Q9NVD3	440 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	EMSY	Q7Z589	1322 aa		27.9	■■■□□ 2.06
RELA-223	ENST00000534283	KCNA2	P16389	499 aa		27.89	■■■□□ 2.06
RELA-223	ENST00000534283	GRB10	Q13322	594 aa		27.89	■■■□□ 2.06
RELA-223	ENST00000534283	PLEKHG4	Q58EX7	1191 aa		27.89	■■■□□ 2.06
RELA-223	ENST00000534283	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	27.89	■■■□□ 2.06
RELA-223	ENST00000534283	MICALL1	Q8N3F8	863 aa		27.89	■■■□□ 2.06
RELA-223	ENST00000534283	UBIAD1	Q9Y5Z9	338 aa		27.89	■■■□□ 2.06
RELA-223	ENST00000534283	MYO9B	Q13459	2157 aa		27.89	■■■□□ 2.05
RELA-223	ENST00000534283	CAND2	O75155	1236 aa		27.88	■■■□□ 2.05
RELA-223	ENST00000534283	FUT2	Q10981	343 aa		27.88	■■■□□ 2.05
RELA-223	ENST00000534283	UBE2S	Q16763	222 aa		27.88	■■■□□ 2.05
RELA-223	ENST00000534283	TSGA10IP	Q3SY00	556 aa		27.88	■■■□□ 2.05
RELA-223	ENST00000534283	CENPQ	Q7L2Z9	268 aa	Predicted RBP	27.88	■■■□□ 2.05
RELA-223	ENST00000534283	RASEF	Q8IZ41	740 aa		27.88	■■■□□ 2.05
RELA-223	ENST00000534283	ZBED2	Q9BTP6	218 aa		27.88	■■■□□ 2.05
RELA-223	ENST00000534283	GTPBP6	O43824	516 aa	Predicted RBP	27.87	■■■□□ 2.05
RELA-223	ENST00000534283	UTP14C	Q5TAP6	766 aa	Known RBP	27.87	■■■□□ 2.05
RELA-223	ENST00000534283	MICU3	Q86XE3	530 aa		27.87	■■■□□ 2.05
RELA-223	ENST00000534283	GIMAP8	Q8ND71	665 aa	Predicted RBP	27.87	■■■□□ 2.05
RELA-223	ENST00000534283	NEK1	Q96PY6	1258 aa		27.87	■■■□□ 2.05
RELA-223	ENST00000534283	BRPF3	Q9ULD4	1205 aa		27.87	■■■□□ 2.05
RELA-223	ENST00000534283	MUC3A	Q02505	3323 aa		27.87	■■■□□ 2.05
RELA-223	ENST00000534283	GSTTP1	A0A1W2PQM5	241 aa		27.86	■■■□□ 2.05
RELA-223	ENST00000534283	GNAT1	P11488	350 aa		27.86	■■■□□ 2.05
RELA-223	ENST00000534283	SP4	Q02446	784 aa		27.86	■■■□□ 2.05
RELA-223	ENST00000534283	RNF20	Q5VTR2	975 aa		27.86	■■■□□ 2.05
RELA-223	ENST00000534283	APOA5	Q6Q788	366 aa		27.86	■■■□□ 2.05
RELA-223	ENST00000534283	CDHR1	Q96JP9	859 aa		27.86	■■■□□ 2.05
RELA-223	ENST00000534283	ZNF215	Q9UL58	517 aa	Predicted RBP	27.86	■■■□□ 2.05
RELA-223	ENST00000534283	PCDHA6	Q9UN73	950 aa		27.86	■■■□□ 2.05
RELA-223	ENST00000534283	PCDHA8	Q9Y5H6	950 aa		27.86	■■■□□ 2.05
RELA-223	ENST00000534283	ERVK-21	P61565	698 aa		27.85	■■■□□ 2.05
RELA-223	ENST00000534283	FAM26D	Q5JW98	314 aa		27.85	■■■□□ 2.05
RELA-223	ENST00000534283	TYW1B	Q6NUM6	668 aa		27.85	■■■□□ 2.05
RELA-223	ENST00000534283	DHX32	Q7L7V1	743 aa	Known RBP	27.85	■■■□□ 2.05
RELA-223	ENST00000534283	HEATR3	Q7Z4Q2	680 aa		27.85	■■■□□ 2.05
RELA-223	ENST00000534283	LMBR1	Q8WVP7	490 aa		27.85	■■■□□ 2.05
RELA-223	ENST00000534283	TSPYL2	Q9H2G4	693 aa	Predicted RBP	27.85	■■■□□ 2.05
RELA-223	ENST00000534283	JADE2	Q9NQC1	790 aa		27.85	■■■□□ 2.05
RELA-223	ENST00000534283	TRIP12	Q14669	1992 aa	Predicted RBP	27.85	■■■□□ 2.05
RELA-223	ENST00000534283	TRANK1	O15050	2925 aa		27.85	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 73 ms