RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 ALADP13716 330 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 SDSP20132 328 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 GPM6BQ13491 265 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 HDAC1Q13547 482 aaPredicted RBP13.57□□□□□ -0.24
TTC39A-218ENST00000534098 COL19A1Q14993 1142 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 ALYREFQ86V81 257 aaKnown RBP13.57□□□□□ -0.24
TTC39A-218ENST00000534098 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.24
TTC39A-218ENST00000534098 ATP6V0A1Q93050 837 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 TOP1MTQ969P6 601 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 PABPC5Q96DU9 382 aaKnown RBP13.57□□□□□ -0.24
TTC39A-218ENST00000534098 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 YME1L1Q96TA2 773 aa13.57□□□□□ -0.24
TTC39A-218ENST00000534098 MAP3K20Q9NYL2 800 aaKnown RBP13.57□□□□□ -0.24
TTC39A-218ENST00000534098 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-218ENST00000534098 H3BRB1 525 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 TREHO43280 583 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 SMIM10L2AP0DMW4 78 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 SMIM10L2BP0DMW5 78 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 HOXA13P31271 388 aaPredicted RBP13.56□□□□□ -0.24
TTC39A-218ENST00000534098 TCEAL5Q5H9L2 206 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 TMEM192Q8IY95 271 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 SAMD3Q8N6K7 520 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 SEPT8Q92599 483 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 RNPEPQ9H4A4 650 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 TUT1Q9H6E5 874 aaKnown RBP13.56□□□□□ -0.24
TTC39A-218ENST00000534098 TTC3P53804 2025 aa13.56□□□□□ -0.24
TTC39A-218ENST00000534098 KIAA1671Q9BY89 1806 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 POTEB3A0JP26 581 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 KLRF2D3W0D1 207 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 ZBTB5O15062 677 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 DCXO43602 365 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 CAND2O75155 1236 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 UPP2O95045 317 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 LGALS2P05162 132 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 CTSHP09668 335 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 CCND2P30279 289 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 ZP2Q05996 745 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 POTEBQ6S5H4 581 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-218ENST00000534098 UIMC1Q96RL1 719 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 LNPKQ9C0E8 428 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 NSUN3Q9H649 340 aaKnown RBP13.55□□□□□ -0.24
TTC39A-218ENST00000534098 BCAS3Q9H6U6 928 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 MLXIPQ9HAP2 919 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 PRKAG3Q9UGI9 489 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 MAD2L2Q9UI95 211 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
TTC39A-218ENST00000534098 LOXHD1Q8IVV2 1947 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 SEC23AQ15436 765 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 SLC35G1Q2M3R5 365 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 IFIT1BQ5T764 474 aaKnown RBP13.54□□□□□ -0.24
TTC39A-218ENST00000534098 CWC27Q6UX04 472 aaKnown RBP13.54□□□□□ -0.24
TTC39A-218ENST00000534098 UBAC1Q9BSL1 405 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 DSCC1Q9BVC3 393 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 IFIH1Q9BYX4 1025 aaKnown RBP13.54□□□□□ -0.24
TTC39A-218ENST00000534098 KRT23Q9C075 422 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 FAM50BQ9Y247 325 aa13.54□□□□□ -0.24
TTC39A-218ENST00000534098 PALM3A6NDB9 673 aaPredicted RBP13.53□□□□□ -0.24
TTC39A-218ENST00000534098 LINC00271P0C7V0 271 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 RRP1P56182 461 aaKnown RBP13.53□□□□□ -0.24
TTC39A-218ENST00000534098 ADAM17P78536 824 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 IMMTQ16891 758 aaKnown RBP13.53□□□□□ -0.24
TTC39A-218ENST00000534098 EP400NLQ6ZTU2 488 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 RPAINQ86UA6 219 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 APBB2Q92870 758 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 USP26Q9BXU7 913 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 CNNM2Q9H8M5 875 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 DIAPH3Q9NSV4 1193 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 SETD4Q9NVD3 440 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 CLDND1Q9NY35 253 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 TECTAO75443 2155 aa13.53□□□□□ -0.24
TTC39A-218ENST00000534098 C5orf67F2Z3F1 127 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 GCOM1H8Y6P7 765 aaPredicted RBP13.52□□□□□ -0.25
TTC39A-218ENST00000534098 NOP56O00567 594 aaKnown RBP13.52□□□□□ -0.25
TTC39A-218ENST00000534098 POLR2MP0CAP2 368 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 ICAM3P32942 547 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 LTBRP36941 435 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 MRE11P49959 708 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 MRPS9P82933 396 aaKnown RBP13.52□□□□□ -0.25
TTC39A-218ENST00000534098 NHLH1Q02575 133 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 FAM26DQ5JW98 314 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 METTL7BQ6UX53 244 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 FCHSD1Q86WN1 690 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 TRIM50Q86XT4 487 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 HOMER1Q86YM7 354 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 PLEKHM2Q8IWE5 1019 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 ADHFE1Q8IWW8 467 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.25
TTC39A-218ENST00000534098 KCNH6Q9H252 994 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 OSBPL3Q9H4L5 887 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 RIOX1Q9H6W3 641 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 FRMPD4Q14CM0 1322 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 C5orf42Q9H799 3197 aa13.52□□□□□ -0.25
TTC39A-218ENST00000534098 GNAT1P11488 350 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 CTNNB1P35222 781 aa13.51□□□□□ -0.25
TTC39A-218ENST00000534098 IRS1P35568 1242 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms