RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SUGCTQ9HAC7 445 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 MTUS1Q9ULD2 1270 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 SNX14Q9Y5W7 946 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 MRVI1Q9Y6F6 885 aa10.07□□□□□ -0.8
COPB1-210ENST00000533533 LINC01553A4QN01 128 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 HAS3O00219 553 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 SH2B2O14492 632 aaPredicted RBP10.06□□□□□ -0.8
COPB1-210ENST00000533533 ZNF286BP0CG31 522 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 HOXD8P13378 290 aaPredicted RBP10.06□□□□□ -0.8
COPB1-210ENST00000533533 CPA1P15085 419 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 COL9A3Q14050 684 aaPredicted RBP10.06□□□□□ -0.8
COPB1-210ENST00000533533 IKBKEQ14164 716 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 MBTPS1Q14703 1052 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 TRIM71Q2Q1W2 868 aaKnown RBP10.06□□□□□ -0.8
COPB1-210ENST00000533533 TMEM31Q5JXX7 168 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 ZNF618Q5T7W0 954 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 BLOC1S2Q6QNY1 142 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 SYNE3Q6ZMZ3 975 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
COPB1-210ENST00000533533 DHX37Q8IY37 1157 aaKnown RBP10.06□□□□□ -0.8
COPB1-210ENST00000533533 IGDCC4Q8TDY8 1250 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 WNT8BQ93098 351 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 MYL10Q9BUA6 226 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 JMJD4Q9H9V9 463 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 LY9Q9HBG7 655 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 PXMP2Q9NR77 195 aa10.06□□□□□ -0.8
COPB1-210ENST00000533533 ARIH1Q9Y4X5 557 aaPredicted RBP10.06□□□□□ -0.8
COPB1-210ENST00000533533 C5orf42Q9H799 3197 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 NLRC5Q86WI3 1866 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 KLRF2D3W0D1 207 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 OPLAHO14841 1288 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 GPR37L1O60883 481 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 PPFIA4O75335 1185 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 RGS20O76081 388 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 CFBP00751 764 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
COPB1-210ENST00000533533 RXRAP19793 462 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 PSMA5P28066 241 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 HSD17B4P51659 736 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 ZNF200P98182 395 aaPredicted RBP10.05□□□□□ -0.8
COPB1-210ENST00000533533 GHRHRQ02643 423 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 FAM117BQ6P1L5 589 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 KCNV1Q6PIU1 500 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 HOMER1Q86YM7 354 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 ZNF654Q8IZM8 581 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 TMTC2Q8N394 836 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 STAG2Q8N3U4 1231 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 CTCFLQ8NI51 663 aaPredicted RBP10.05□□□□□ -0.8
COPB1-210ENST00000533533 PIBF1Q8WXW3 757 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 KHSRPQ92945 711 aaKnown RBP eCLIP10.05□□□□□ -0.88e-11■■□□□ 12.2
COPB1-210ENST00000533533 AMNQ9BXJ7 453 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 USP26Q9BXU7 913 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 UBE2ZQ9H832 354 aaPredicted RBP10.05□□□□□ -0.8
COPB1-210ENST00000533533 HCN4Q9Y3Q4 1203 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 INSL6Q9Y581 213 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 SLC12A7Q9Y666 1083 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 EMSYQ7Z589 1322 aa10.05□□□□□ -0.8
COPB1-210ENST00000533533 DOCK5Q9H7D0 1870 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.04□□□□□ -0.8
COPB1-210ENST00000533533 RBAK-RBAKDNI3L0D1 243 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 EIF5BO60841 1220 aaKnown RBP10.04□□□□□ -0.8
COPB1-210ENST00000533533 LGR5O75473 907 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 HIC1Q14526 733 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 GRM4Q14833 912 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 HSDL1Q3SXM5 330 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 TSGA10IPQ3SY00 556 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 CELF3Q5SZQ8 465 aaKnown RBP10.04□□□□□ -0.8
COPB1-210ENST00000533533 SERINC5Q86VE9 423 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 VSIG10LQ86VR7 867 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 MICU3Q86XE3 530 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 PDCD2LQ9BRP1 358 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 MTA3Q9BTC8 594 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 CD320Q9NPF0 282 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 C11orf16Q9NQ32 467 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 MAP3K20Q9NYL2 800 aaKnown RBP10.04□□□□□ -0.8
COPB1-210ENST00000533533 MAD2L2Q9UI95 211 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 ZDBF2Q9HCK1 2354 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 ZNF318Q5VUA4 2279 aa10.04□□□□□ -0.8
COPB1-210ENST00000533533 RSPH10B2B2RC85 870 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 PI4K2BG5E9Z4 385 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 ZBTB5O15062 677 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 SORBS3O60504 671 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 PPP1R11O60927 126 aaPredicted RBP10.03□□□□□ -0.8
COPB1-210ENST00000533533 DDAH1O94760 285 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 GGPS1O95749 300 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 AMHP03971 560 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 RSPH10BP0C881 870 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 TGFB3P10600 412 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 MYCLP12524 364 aaPredicted RBP10.03□□□□□ -0.8
COPB1-210ENST00000533533 KCNA5P22460 613 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 HOXA13P31271 388 aaPredicted RBP10.03□□□□□ -0.8
COPB1-210ENST00000533533 KIF5BP33176 963 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 THPOP40225 353 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 LIFRP42702 1097 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 HTRA4P83105 476 aaPredicted RBP10.03□□□□□ -0.8
COPB1-210ENST00000533533 SP2Q02086 613 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 PGM5Q15124 567 aa10.03□□□□□ -0.8
COPB1-210ENST00000533533 LEXMQ3ZCV2 418 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms