RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 TBC1D22BQ9NU19 505 aa23.82■■□□□ 1.4
VPS51-211ENST00000533487 PDE4DIPQ5VU43 2346 aa23.82■■□□□ 1.4
VPS51-211ENST00000533487 ARVCFO00192 962 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 MYL3P08590 195 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 PTPN11Q06124 597 aaPredicted RBP23.81■■□□□ 1.4
VPS51-211ENST00000533487 LRRC26Q2I0M4 334 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 Q4G0T1 1027 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 PPP4R3AQ6IN85 833 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 CYFIP1Q7L576 1253 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 ANKRD33Q7Z3H0 272 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 NEK8Q86SG6 692 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 DIS3L2Q8IYB7 885 aaKnown RBP23.81■■□□□ 1.4
VPS51-211ENST00000533487 FOXP1Q9H334 677 aaPredicted RBP23.81■■□□□ 1.4
VPS51-211ENST00000533487 AGO4Q9HCK5 861 aaKnown RBP23.81■■□□□ 1.4
VPS51-211ENST00000533487 SMC3Q9UQE7 1217 aa23.81■■□□□ 1.4
VPS51-211ENST00000533487 K7ELQ4 463 aaPredicted RBP23.8■■□□□ 1.4
VPS51-211ENST00000533487 CDK7P50613 346 aa23.8■■□□□ 1.4
VPS51-211ENST00000533487 RTP1P59025 263 aa23.8■■□□□ 1.4
VPS51-211ENST00000533487 IRX5P78411 483 aaPredicted RBP23.8■■□□□ 1.4
VPS51-211ENST00000533487 HSDL1Q3SXM5 330 aa23.8■■□□□ 1.4
VPS51-211ENST00000533487 CYP2W1Q8TAV3 490 aa23.8■■□□□ 1.4
VPS51-211ENST00000533487 TNFRSF25Q93038 417 aa23.8■■□□□ 1.4
VPS51-211ENST00000533487 MBOAT7Q96N66 472 aa23.8■■□□□ 1.4
VPS51-211ENST00000533487 JPH1Q9HDC5 661 aaPredicted RBP23.8■■□□□ 1.4
VPS51-211ENST00000533487 GJB4Q9NTQ9 266 aa23.8■■□□□ 1.4
VPS51-211ENST00000533487 IPO5O00410 1097 aaKnown RBP23.79■■□□□ 1.4
VPS51-211ENST00000533487 ATP9AO75110 1047 aa23.79■■□□□ 1.4
VPS51-211ENST00000533487 ITGA7Q13683 1181 aa23.79■■□□□ 1.4
VPS51-211ENST00000533487 NFRKBQ6P4R8 1299 aa23.79■■□□□ 1.4
VPS51-211ENST00000533487 GPR20Q99678 358 aa23.79■■□□□ 1.4
VPS51-211ENST00000533487 SLC9A2Q9UBY0 812 aa23.79■■□□□ 1.4
VPS51-211ENST00000533487 TCEAL9Q9UHQ7 104 aa23.79■■□□□ 1.4
VPS51-211ENST00000533487 DCDC2CA8MYV0 355 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 BTBD18B2RXH4 712 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 F2P00734 622 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 ARP10275 920 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 PTGS1P23219 599 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 ATN1P54259 1190 aaPredicted RBP23.78■■□□□ 1.4
VPS51-211ENST00000533487 INF2Q27J81 1249 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 PRR16Q569H4 304 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 PIK3AP1Q6ZUJ8 805 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 OXER1Q8TDS5 423 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 SEPT1Q8WYJ6 367 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 RIT2Q99578 217 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 ZNF577Q9BSK1 485 aa23.78■■□□□ 1.4
VPS51-211ENST00000533487 TLR3O15455 904 aaKnown RBP23.77■■□□□ 1.4
VPS51-211ENST00000533487 PDCP20941 246 aa23.77■■□□□ 1.4
VPS51-211ENST00000533487 GJB2P29033 226 aa23.77■■□□□ 1.4
VPS51-211ENST00000533487 ORC2Q13416 577 aaPredicted RBP23.77■■□□□ 1.4
VPS51-211ENST00000533487 SESTD1Q86VW0 696 aa23.77■■□□□ 1.4
VPS51-211ENST00000533487 LENG9Q96B70 501 aa23.77■■□□□ 1.4
VPS51-211ENST00000533487 ZNF215Q9UL58 517 aaPredicted RBP23.77■■□□□ 1.4
VPS51-211ENST00000533487 MKI67P46013 3256 aaKnown RBP23.76■■□□□ 1.39
VPS51-211ENST00000533487 TBX3O15119 743 aa23.76■■□□□ 1.39
VPS51-211ENST00000533487 TNRC18O15417 2968 aaPredicted RBP23.76■■□□□ 1.39
VPS51-211ENST00000533487 KRT76Q01546 638 aa23.76■■□□□ 1.39
VPS51-211ENST00000533487 NR5A1Q13285 461 aa23.76■■□□□ 1.39
VPS51-211ENST00000533487 HSCBQ8IWL3 235 aa23.76■■□□□ 1.39
VPS51-211ENST00000533487 TNPO1Q92973 898 aaKnown RBP23.76■■□□□ 1.39
VPS51-211ENST00000533487 HAS3O00219 553 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 EDIL3O43854 480 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 SUPT20HL2P0C7V6 817 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 TRAPPC10P48553 1259 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 GNL2Q13823 731 aaKnown RBP23.75■■□□□ 1.39
VPS51-211ENST00000533487 LETM2Q2VYF4 491 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 TRIM60Q495X7 471 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 ZNF746Q6NUN9 644 aaPredicted RBP23.75■■□□□ 1.39
VPS51-211ENST00000533487 SMAP1Q8IYB5 467 aaPredicted RBP23.75■■□□□ 1.39
VPS51-211ENST00000533487 FAM20AQ96MK3 541 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 PRKAG2Q9UGJ0 569 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 DDX25Q9UHL0 483 aaKnown RBP23.75■■□□□ 1.39
VPS51-211ENST00000533487 ATP11BQ9Y2G3 1177 aa23.75■■□□□ 1.39
VPS51-211ENST00000533487 DHX15O43143 795 aaKnown RBP23.74■■□□□ 1.39
VPS51-211ENST00000533487 DTNBO60941 627 aa23.74■■□□□ 1.39
VPS51-211ENST00000533487 ATG7O95352 703 aa23.74■■□□□ 1.39
VPS51-211ENST00000533487 LGALS2P05162 132 aa23.74■■□□□ 1.39
VPS51-211ENST00000533487 PDIA4P13667 645 aaKnown RBP23.74■■□□□ 1.39
VPS51-211ENST00000533487 U2AF2P26368 475 aaKnown RBP eCLIP23.74■■□□□ 1.39
VPS51-211ENST00000533487 TLE2Q04725 743 aa23.74■■□□□ 1.39
VPS51-211ENST00000533487 ITGB3BPQ13352 177 aaPredicted RBP23.74■■□□□ 1.39
VPS51-211ENST00000533487 KAT2BQ92831 832 aa23.74■■□□□ 1.39
VPS51-211ENST00000533487 SLC5A5Q92911 643 aa23.74■■□□□ 1.39
VPS51-211ENST00000533487 C16orf70Q9BSU1 422 aa23.74■■□□□ 1.39
VPS51-211ENST00000533487 EMSYQ7Z589 1322 aa23.74■■□□□ 1.39
VPS51-211ENST00000533487 H3BRB1 525 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 MSH4O15457 936 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 CLTBP09497 229 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 TCF7P36402 384 aaPredicted RBP23.73■■□□□ 1.39
VPS51-211ENST00000533487 PSEN2P49810 448 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 SLC26A2P50443 739 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 NBPF20Q3BBV1 942 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 NOSTRINQ8IVI9 506 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 FAM126BQ8IXS8 530 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 C7orf61Q8IZ16 206 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 RDM1Q8NG50 284 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 SMARCAD1Q9H4L7 1026 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 TUT1Q9H6E5 874 aaKnown RBP23.73■■□□□ 1.39
VPS51-211ENST00000533487 GRIN2DO15399 1336 aa23.73■■□□□ 1.39
VPS51-211ENST00000533487 GSTTP1A0A1W2PQM5 241 aa23.72■■□□□ 1.39
VPS51-211ENST00000533487 H3BQV1 296 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms