RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 ENGASEQ8NFI3 743 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 CD99L2Q8TCZ2 262 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 TEKT3Q9BXF9 490 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 SRRDQ9UH36 339 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 GABRQQ9UN88 632 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 DDX49Q9Y6V7 483 aaKnown RBP15.89■□□□□ 0.13
HIF3A-215ENST00000533145 DOCK5Q9H7D0 1870 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 GAS7O60861 476 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 SLC34A2O95436 690 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 FLT3LGP49771 235 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 PRMT2P55345 433 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 CCDC62Q6P9F0 684 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 SEPT14Q6ZU15 432 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 FSIP1Q8NA03 581 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 GIMAP8Q8ND71 665 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-215ENST00000533145 GPT2Q8TD30 523 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 ZNF296Q8WUU4 475 aaPredicted RBP15.88■□□□□ 0.13
HIF3A-215ENST00000533145 GJA10Q969M2 543 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 EPSTI1Q96J88 318 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 FAM13BQ9NYF5 915 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 FLRT1Q9NZU1 646 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 LRWD1Q9UFC0 647 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 NRBP1Q9UHY1 535 aa15.88■□□□□ 0.13
HIF3A-215ENST00000533145 DDX41Q9UJV9 622 aaKnown RBP15.88■□□□□ 0.13
HIF3A-215ENST00000533145 SP2Q02086 613 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 PRKCZQ05513 592 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 SNW1Q13573 536 aaKnown RBP15.87■□□□□ 0.13
HIF3A-215ENST00000533145 ACVR2BQ13705 512 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 NEDD9Q14511 834 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 KLHL40Q2TBA0 621 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 SPECC1Q5M775 1068 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 USP49Q70CQ1 688 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 FMR1NBQ8N0W7 255 aaPredicted RBP15.87■□□□□ 0.13
HIF3A-215ENST00000533145 RDM1Q8NG50 284 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 SCFD2Q8WU76 684 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 SYMPKQ92797 1274 aaKnown RBP15.87■□□□□ 0.13
HIF3A-215ENST00000533145 MMTAG2Q9BU76 263 aaKnown RBP15.87■□□□□ 0.13
HIF3A-215ENST00000533145 GOLPH3LQ9H4A5 285 aa15.87■□□□□ 0.13
HIF3A-215ENST00000533145 A0A1B0GVL5 298 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 POTEMA6NI47 508 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 ECM2O94769 699 aaPredicted RBP15.86■□□□□ 0.13
HIF3A-215ENST00000533145 PFKFB1P16118 471 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 LIG1P18858 919 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 MUTP22033 750 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 SFNP31947 248 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 UBA7P41226 1012 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 KRT76Q01546 638 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 FAM160A1Q05DH4 1040 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 TTLL4Q14679 1199 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 EPHA7Q15375 998 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 CCL14Q16627 93 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 HYIQ5T013 277 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 IQSEC1Q6DN90 963 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 ZNF746Q6NUN9 644 aaPredicted RBP15.86■□□□□ 0.13
HIF3A-215ENST00000533145 CCDC73Q6ZRK6 1079 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 EEPD1Q7L9B9 569 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 FBXO16Q8IX29 292 aaPredicted RBP15.86■□□□□ 0.13
HIF3A-215ENST00000533145 KCTD17Q8N5Z5 321 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 SDF4Q9BRK5 362 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 PYM1Q9BRP8 204 aaKnown RBP15.86■□□□□ 0.13
HIF3A-215ENST00000533145 UNC45AQ9H3U1 944 aa15.86■□□□□ 0.13
HIF3A-215ENST00000533145 NKRFO15226 690 aaKnown RBP eCLIP15.85■□□□□ 0.13
HIF3A-215ENST00000533145 ATG7O95352 703 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 ARIH2O95376 493 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 CDC25AP30304 524 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 TXLNAP40222 546 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 NDUFA8P51970 172 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 KRT79Q5XKE5 535 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 CABP7Q86V35 215 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 ERMNQ8TAM6 284 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 PXYLP1Q8TE99 480 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 TIGD1Q96MW7 591 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 UIMC1Q96RL1 719 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 POLR3CQ9BUI4 534 aaPredicted RBP15.85■□□□□ 0.13
HIF3A-215ENST00000533145 PDGFCQ9NRA1 345 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 SLC9A2Q9UBY0 812 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 CCDC39Q9UFE4 941 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 USP25Q9UHP3 1055 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 KCNH3Q9ULD8 1083 aa15.85■□□□□ 0.13
HIF3A-215ENST00000533145 PP2D1A8MPX8 630 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 EML1O00423 815 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 TRAK2O60296 914 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 ZNF202O95125 648 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 ZNF865P0CJ78 1059 aaPredicted RBP15.84■□□□□ 0.13
HIF3A-215ENST00000533145 TXNP10599 105 aaKnown RBP15.84■□□□□ 0.13
HIF3A-215ENST00000533145 UBA1P22314 1058 aaKnown RBP15.84■□□□□ 0.13
HIF3A-215ENST00000533145 RPA1P27694 616 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 SYKP43405 635 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 JAK3P52333 1124 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 CELF3Q5SZQ8 465 aaKnown RBP15.84■□□□□ 0.13
HIF3A-215ENST00000533145 MFSD14CQ5VZR4 134 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 METTL7BQ6UX53 244 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 SMAP1Q8IYB5 467 aaPredicted RBP15.84■□□□□ 0.13
HIF3A-215ENST00000533145 ELOA2Q8IYF1 753 aaPredicted RBP15.84■□□□□ 0.13
HIF3A-215ENST00000533145 NEK9Q8TD19 979 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 HSD17B14Q9BPX1 270 aa15.84■□□□□ 0.13
HIF3A-215ENST00000533145 MYH9P35579 1960 aaKnown RBP15.84■□□□□ 0.13
HIF3A-215ENST00000533145 NR1I2O75469 434 aa15.83■□□□□ 0.12
HIF3A-215ENST00000533145 FARP2O94887 1054 aaPredicted RBP15.83■□□□□ 0.12
HIF3A-215ENST00000533145 CCNE2O96020 404 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms