RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 TRAF7Q6Q0C0 670 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
CMTM1-216ENST00000533078 WNT8BQ93098 351 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 TOP1MTQ969P6 601 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 POP1Q99575 1024 aaKnown RBP13.4□□□□□ -0.26
CMTM1-216ENST00000533078 USP26Q9BXU7 913 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 IFIH1Q9BYX4 1025 aaKnown RBP13.4□□□□□ -0.26
CMTM1-216ENST00000533078 CD320Q9NPF0 282 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 LAMA4Q16363 1823 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 KLRF2D3W0D1 207 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 STAM2O75886 525 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 CTSHP09668 335 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 SMIM10L2AP0DMW4 78 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 SMIM10L2BP0DMW5 78 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 UBA1P22314 1058 aaKnown RBP13.39□□□□□ -0.27
CMTM1-216ENST00000533078 GHRHRQ02643 423 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 TRDNQ13061 729 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
CMTM1-216ENST00000533078 PGM5Q15124 567 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 CWC27Q6UX04 472 aaKnown RBP13.39□□□□□ -0.27
CMTM1-216ENST00000533078 ALYREFQ86V81 257 aaKnown RBP13.39□□□□□ -0.27
CMTM1-216ENST00000533078 VSIG10LQ86VR7 867 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 KCNH6Q9H252 994 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 CLDND1Q9NY35 253 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 ZSWIM5Q9P217 1185 aa13.39□□□□□ -0.27
CMTM1-216ENST00000533078 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 ERICH2A1L162 156 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 TREHO43280 583 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 LGALS2P05162 132 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 HOXA13P31271 388 aaPredicted RBP13.38□□□□□ -0.27
CMTM1-216ENST00000533078 CTNNB1P35222 781 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 TCEAL5Q5H9L2 206 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 FCHSD1Q86WN1 690 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 PPP2R3CQ969Q6 453 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 IL17RAQ96F46 866 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 C16orf70Q9BSU1 422 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 C11orf84Q9BUA3 381 aaPredicted RBP13.38□□□□□ -0.27
CMTM1-216ENST00000533078 DSCC1Q9BVC3 393 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 LMAN2LQ9H0V9 348 aa13.38□□□□□ -0.27
CMTM1-216ENST00000533078 RB1P06400 928 aa13.37□□□□□ -0.27
CMTM1-216ENST00000533078 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
CMTM1-216ENST00000533078 METTL7BQ6UX53 244 aa13.37□□□□□ -0.27
CMTM1-216ENST00000533078 RSPH3Q86UC2 560 aa13.37□□□□□ -0.27
CMTM1-216ENST00000533078 ADHFE1Q8IWW8 467 aa13.37□□□□□ -0.27
CMTM1-216ENST00000533078 RNPEPQ9H4A4 650 aa13.37□□□□□ -0.27
CMTM1-216ENST00000533078 RALGAPA2Q2PPJ7 1873 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 NLRC5Q86WI3 1866 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 KAT6AQ92794 2004 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 FIBPO43427 364 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 RGS20O76081 388 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 ARHGAP4P98171 946 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 ZP2Q05996 745 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
CMTM1-216ENST00000533078 RPAINQ86UA6 219 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 GIMAP8Q8ND71 665 aaPredicted RBP13.36□□□□□ -0.27
CMTM1-216ENST00000533078 CUL5Q93034 780 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 MFSD14AQ96MC6 490 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 COL4A6Q14031 1691 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 TRIOO75962 3097 aa13.36□□□□□ -0.27
CMTM1-216ENST00000533078 OPLAHO14841 1288 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 HOXC8P31273 242 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 MRE11P49959 708 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 SP2Q02086 613 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-216ENST00000533078 AAMPQ13685 434 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 HIC1Q14526 733 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
CMTM1-216ENST00000533078 B4GALNT3Q6L9W6 998 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 TAF2Q6P1X5 1199 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 CYFIP1Q7L576 1253 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 IL31RAQ8NI17 732 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 MTMR8Q96EF0 704 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
CMTM1-216ENST00000533078 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 MAD2L2Q9UI95 211 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 NRCAMQ92823 1304 aa13.35□□□□□ -0.27
CMTM1-216ENST00000533078 PNMA6FA0A0J9YX94 578 aa13.34□□□□□ -0.27
CMTM1-216ENST00000533078 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.34□□□□□ -0.27
CMTM1-216ENST00000533078 RPLP2P05387 115 aaKnown RBP13.34□□□□□ -0.27
CMTM1-216ENST00000533078 ICAM3P32942 547 aa13.34□□□□□ -0.27
CMTM1-216ENST00000533078 SP4Q02446 784 aa13.34□□□□□ -0.27
CMTM1-216ENST00000533078 RALYLQ86SE5 291 aaKnown RBP13.34□□□□□ -0.27
CMTM1-216ENST00000533078 NLRX1Q86UT6 975 aa13.34□□□□□ -0.27
CMTM1-216ENST00000533078 ADGRA3Q8IWK6 1321 aa13.34□□□□□ -0.27
CMTM1-216ENST00000533078 POTEB3A0JP26 581 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 PALM3A6NDB9 673 aaPredicted RBP13.33□□□□□ -0.28
CMTM1-216ENST00000533078 SPATA31C2B4DYI2 1134 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 C5orf67F2Z3F1 127 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 PPP1R11O60927 126 aaPredicted RBP13.33□□□□□ -0.28
CMTM1-216ENST00000533078 BMPR1AP36894 532 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 BTG3Q14201 252 aaPredicted RBP13.33□□□□□ -0.28
CMTM1-216ENST00000533078 FAM26DQ5JW98 314 aa13.33□□□□□ -0.28
CMTM1-216ENST00000533078 XRRA1Q6P2D8 792 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms