RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CLK2P49760 499 aaKnown RBP19.04■□□□□ 0.64
PKP3-209ENST00000533069 NTRK3Q16288 839 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 RASIP1Q5U651 963 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 GDF6Q6KF10 455 aaPredicted RBP19.04■□□□□ 0.64
PKP3-209ENST00000533069 RETREG2Q8NC44 543 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 CAGE1Q8TC20 777 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 PPP1R13LQ8WUF5 828 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 ZNF274Q96GC6 653 aaPredicted RBP19.04■□□□□ 0.64
PKP3-209ENST00000533069 GPR20Q99678 358 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 ANO3Q9BYT9 981 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 ZMYND12Q9H0C1 365 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 C6orf50Q9HD87 102 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 JADE2Q9NQC1 790 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 PDRG1Q9NUG6 133 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 HDAC6Q9UBN7 1215 aa19.04■□□□□ 0.64
PKP3-209ENST00000533069 H3BRB1 525 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 FGBP02675 491 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 LGALS2P05162 132 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 ACRP10323 421 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 KCNA2P16389 499 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 SREBF1P36956 1147 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 PKN1Q16512 942 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 ZNF365Q70YC5 407 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 CCDC148Q8NFR7 591 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 AFAP1L1Q8TED9 768 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 HERVK_113Q902F9 699 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 PHKBQ93100 1093 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 TUT1Q9H6E5 874 aaKnown RBP19.03■□□□□ 0.64
PKP3-209ENST00000533069 BCAS3Q9H6U6 928 aa19.03■□□□□ 0.64
PKP3-209ENST00000533069 ZNF215Q9UL58 517 aaPredicted RBP19.03■□□□□ 0.64
PKP3-209ENST00000533069 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.02■□□□□ 0.64
PKP3-209ENST00000533069 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.02■□□□□ 0.64
PKP3-209ENST00000533069 GNA11P29992 359 aa19.02■□□□□ 0.64
PKP3-209ENST00000533069 CCT2P78371 535 aaKnown RBP19.02■□□□□ 0.64
PKP3-209ENST00000533069 RBL2Q08999 1139 aa19.02■□□□□ 0.64
PKP3-209ENST00000533069 ZNF697Q5TEC3 545 aa19.02■□□□□ 0.64
PKP3-209ENST00000533069 TRIM22Q8IYM9 498 aa19.02■□□□□ 0.64
PKP3-209ENST00000533069 SCLYQ96I15 445 aa19.02■□□□□ 0.64
PKP3-209ENST00000533069 CTAGE1Q96RT6 745 aa19.02■□□□□ 0.64
PKP3-209ENST00000533069 MXRA8Q9BRK3 442 aa19.02■□□□□ 0.64
PKP3-209ENST00000533069 SLC26A6Q9BXS9 759 aa19.02■□□□□ 0.64
PKP3-209ENST00000533069 NCOA5Q9HCD5 579 aaKnown RBP19.02■□□□□ 0.64
PKP3-209ENST00000533069 CPLX1O14810 134 aa19.01■□□□□ 0.63
PKP3-209ENST00000533069 PTK7Q13308 1070 aa19.01■□□□□ 0.63
PKP3-209ENST00000533069 CEP55Q53EZ4 464 aa19.01■□□□□ 0.63
PKP3-209ENST00000533069 CPLX2Q6PUV4 134 aaKnown RBP19.01■□□□□ 0.63
PKP3-209ENST00000533069 Q7L0L9 218 aa19.01■□□□□ 0.63
PKP3-209ENST00000533069 REXO1Q8N1G1 1221 aaKnown RBP19.01■□□□□ 0.63
PKP3-209ENST00000533069 BICD2Q8TD16 824 aa19.01■□□□□ 0.63
PKP3-209ENST00000533069 TMEM260Q9NX78 707 aa19.01■□□□□ 0.63
PKP3-209ENST00000533069 LAMA2P24043 3122 aaKnown RBP19.01■□□□□ 0.63
PKP3-209ENST00000533069 TMEM265A0A087WTH1 108 aa19■□□□□ 0.63
PKP3-209ENST00000533069 ATP9AO75110 1047 aa19■□□□□ 0.63
PKP3-209ENST00000533069 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
PKP3-209ENST00000533069 IQCF3P0C7M6 154 aa19■□□□□ 0.63
PKP3-209ENST00000533069 RBM25P49756 843 aaKnown RBP19■□□□□ 0.63
PKP3-209ENST00000533069 ARHGAP4P98171 946 aa19■□□□□ 0.63
PKP3-209ENST00000533069 IL17RAQ96F46 866 aa19■□□□□ 0.63
PKP3-209ENST00000533069 PGBD1Q96JS3 809 aa19■□□□□ 0.63
PKP3-209ENST00000533069 C22orf23Q9BZE7 217 aa19■□□□□ 0.63
PKP3-209ENST00000533069 SH3GLB2Q9NR46 395 aa19■□□□□ 0.63
PKP3-209ENST00000533069 KCNH7Q9NS40 1196 aa19■□□□□ 0.63
PKP3-209ENST00000533069 C17orf102A2RUQ5 167 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 SEC24BO95487 1268 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 SELPP16109 830 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 HOXC8P31273 242 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 SP4Q02446 784 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 SSRP1Q08945 709 aaKnown RBP18.99■□□□□ 0.63
PKP3-209ENST00000533069 JAKMIP3Q5VZ66 844 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 NIPA1Q7RTP0 329 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 FAM177A1Q8N128 213 aaPredicted RBP18.99■□□□□ 0.63
PKP3-209ENST00000533069 SEPT1Q8WYJ6 367 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 DHX38Q92620 1227 aaKnown RBP18.99■□□□□ 0.63
PKP3-209ENST00000533069 TBC1D32Q96NH3 1257 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 JPH1Q9HDC5 661 aaPredicted RBP18.99■□□□□ 0.63
PKP3-209ENST00000533069 MTMR10Q9NXD2 777 aa18.99■□□□□ 0.63
PKP3-209ENST00000533069 MEIS1O00470 390 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 CDKL5O76039 1030 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 DEXIO95424 95 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 CYP3A4P08684 503 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 SMIM10L2AP0DMW4 78 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 SMIM10L2BP0DMW5 78 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 GNAT1P11488 350 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 ACTN1P12814 892 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 TCF7P36402 384 aaPredicted RBP18.98■□□□□ 0.63
PKP3-209ENST00000533069 ZNF76P36508 570 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 ANKRD1Q15327 319 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 UTP14CQ5TAP6 766 aaKnown RBP18.98■□□□□ 0.63
PKP3-209ENST00000533069 LRRC8DQ7L1W4 858 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 OTOP2Q7RTS6 562 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 SERINC5Q86VE9 423 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 VWCEQ96DN2 955 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 SDF4Q9BRK5 362 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 PKD2L1Q9P0L9 805 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 NFASCO94856 1347 aa18.98■□□□□ 0.63
PKP3-209ENST00000533069 CKBP12277 381 aa18.97■□□□□ 0.63
PKP3-209ENST00000533069 DNAJB2P25686 324 aa18.97■□□□□ 0.63
PKP3-209ENST00000533069 DEFB128Q7Z7B8 93 aa18.97■□□□□ 0.63
PKP3-209ENST00000533069 TRIM50Q86XT4 487 aa18.97■□□□□ 0.63
PKP3-209ENST00000533069 CYP2W1Q8TAV3 490 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms